Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g3991 | ATGAATAACGATGACCACAACGGGCGGGAAGAAGATCAGAGTACCGTCGCGAGCCAAGATTCCAGATTCAATCAGACGCTCAGGAATGTTCAAGGCTTACTGAAAGGTCGTAGCATCCCTGGTAAAATACTATTGACTCGGAGATCGGACCTGCTAGATAATGCAATGGATTATTCACCAACTTACCAAAGGAGCTTCTCATTCAATGATGCTGGCACAAGTGATCACCCAGCTAAGGCAGCAGAGGAAGAAGTCCAGAGTACAAGCAAATCAATCAGTATTGCCGATGTGAATAAGTTAAAAAAATCAAACTCTGAAATTAAGAACCCATCTGAAGAAGTCCGAAAATCTTTCACAGGTGCTAGAGCTACAGATTCTGCAAGAGTTTTGAAGTTCACTAAGGTGCTTTCTGGGACAACGGTAATATTAGAGAAGTTGCGTGAATTAGCTTGGAGTGGTGTTTCAGATTATATGCGTCCTACAGTATGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTTAGAAGGAAGCGCCTTGAATATCTTGACTGTGTTTCTCAGTATTACAATATTCCTGATACACAACGTTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGACTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACAACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATACGTTCAGGGAATTAATGATCTTGTAACGCCGTTTTTAGTTGTTTTCCTATCAGAATACTTAGAAGGGGGTATAGATAATTGGTCAATGTCTGATTTATCTTCAGATAAAATTAGTAATATAGAGGCTGACTGCTATTGGTGCTTGTCAAAGTTGCTTCATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATCCAGAGGCTTGTCTTCAAGTTGAAGGAATTGGTCCGGAGGATTGATGAGCCTGTCTCTAGACATGTGGAGGATCAAGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTTTAATCCGTGAGATACCCTTCCATCTCATCACGCGTCTTTGGGATACGTATCTGGCTGAAGGAGATGCCTTACCAGATTTCCTTGTGTACATATTTGCCAGTTTTCTTCTTACGTGGTCAGATAAGCTCCAGAAACTTGATTTCCAAGAGCTGGTAATGTTCCTTCAACATCTTCCAACTCATAACTGGACTCACCAGGAGCTTGAAATGGTGCTTTCTCGCGCCTTCGTGTGGCACAGCATGTTCAACAACTCTCCTAGCCATTTGGCTAGCTGA | 1353 | 0.4279 | MNNDDHNGREEDQSTVASQDSRFNQTLRNVQGLLKGRSIPGKILLTRRSDLLDNAMDYSPTYQRSFSFNDAGTSDHPAKAAEEEVQSTSKSISIADVNKLKKSNSEIKNPSEEVRKSFTGARATDSARVLKFTKVLSGTTVILEKLRELAWSGVSDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYNIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSMSDLSSDKISNIEADCYWCLSKLLHGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTHNWTHQELEMVLSRAFVWHSMFNNSPSHLAS | 450 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g3991 | 450 | Pfam | Rab-GTPase-TBC domain | 157 | 401 | IPR000195 | - | |
| Bisa02g3991 | 450 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 316 | 438 | IPR035969 | - | |
| Bisa02g3991 | 450 | FunFam | TBC1 domain family member | 127 | 179 | - | - | |
| Bisa02g3991 | 450 | ProSiteProfiles | TBC/rab GAP domain profile. | 153 | 380 | IPR000195 | - | |
| Bisa02g3991 | 450 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 190 | 314 | - | - | |
| Bisa02g3991 | 450 | MobiDBLite | consensus disorder prediction | 63 | 88 | - | - | |
| Bisa02g3991 | 450 | Gene3D | - | 315 | 450 | - | - | |
| Bisa02g3991 | 450 | Gene3D | - | 131 | 181 | - | - | |
| Bisa02g3991 | 450 | FunFam | TBC domain containing protein | 183 | 314 | - | - | |
| Bisa02g3991 | 450 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 133 | 340 | IPR035969 | - | |
| Bisa02g3991 | 450 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Bisa02g3991 | 450 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bisa02g3991 | 450 | SMART | tbc_4 | 150 | 406 | IPR000195 | - | |
| Bisa02g3991 | 450 | FunFam | TBC domain containing protein | 315 | 450 | - | - | |
| Bisa02g3991 | 450 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 106 | 419 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g3991 | Bisa-ChrBisa02 | 94298522 | 94304396 | Proximal |