Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3986 ATGGAATACCCTTTTTCTCCAAGGGGAAAAGACAGTGGGTATTGGATGTCTCCTCGAGCCCAGTTGGAGGGATCAACATCATTAGATGGTGGTACAAGAAATTCAATTTCAGAGGAGATGCTTAACACCTTCTCGGAGCTCATGAATTTTGATACTTATGCCGGTTGGTGCAATAGCTCATCAACGACAGATCAGAATTTAGCTAATGGGCTTTCATCGTTTACCTCTGTACCATATGCATCACCTGATAGATTCAATTTAATGGAGCAGTGCAGTGGGCCATTCTTTACGAGTGACGTTAATAGAAATTACGATGATATAAGAAGTTTCCCCAGTTCTAGGGAGAAAGTCGTATTTCAGCAAATGGACACCCAATTTGGATTCTCTGATGATGCAAATGATGCAGATAACCTAAACTCTAAAGAACATGTTAATGAATCTTTTCAACAAGTTGATAATTTAGAGATGGGCAATTATATAATTTCTAGGCCGCCTGGCTGGTCACTAGATGAGAGAATGCTGAGGGCTTTGTCCCTTTTCAAGGATTCAGCTGGTGGGGGGATATTAGCGCAAGTTTGGGTACCCGTAAAGCATGGGGATCAGTTCATCTTAACCACAAGTGAACAACCCTATTTGCTAGATCAGCTGCTTGCAGGATATCGGGAAGTGTCAAGGACATTTACATTCTCGGCAGAAGGAAGACCTGGTTCTTTCCCAGGACTTCCTGGTCGAGTCTTTATCTCTAAAGTTCCTGAGTGGACTTCCAATGTTGGTTACTACAATGAGAATGAGTATTTGAGGGTTGAGCATGCAAAGAAGCATGAGGTTCGTGGTTCAATTGCTGTTCCTGTATTTGATTCTCACTCTGAATTTCCATGCTGTGCTGTGCTGGAACTTGTTACCACAAAGGAAAAACCTGATTTTGACAGAGAACTGGAAATTGTTTGTCATGCGCTCCAGGTTGTAGATTTAAGGACTACTACCCCTCCTCGACTACTTCCCCAGAGTCTCTCAAATAACAAAAGAGCTGCTTTAATAGAGATAATTGATGTGTTGCGAGCTGTGTGTCACGCACATAGTTTGCCCCTGGCATTGACATGGATCCCCTGTTCTTACACTGAAGAAATTGGCAATGGAAATGTCAGATTACAAGTTAAGGAGGGCTACTCAAGTTCTAGTGAGAAATGGGTATTATGTGTTGAAGAATCAGCTTGCTATGTAAATGATAGAACAATGGAAGGATTTGTTCATGCATGTGCTGAACATCATCTTGAGGAAGGGCAAGGTATAGCTGGGAAAGCTATTCAGTCAAATCATCCATTCTTTTATCCTGATGTGAAGGCATATAATATTGGTGAATATCCCCTTGTTCAACACGCACGCAAATATAATTTGAATGCTGCTGTAGCAATCAGGCTAAGAAGTACCTTCACTAACGATGATGATTACATTTTAGAATTCTTTATACCTGTCAATATGAGAGGGAGTTCTGAACAGCAACTTTTATTAGACAACCTCTCAGGCACTATGCAGAGAATTTGTAGGAGTTTGAGGACAGTTACAGATGTCGAATTATCAGGAATATCAGGGTCACAGATGGAATTTCAAAATGAAGAAGTATGTGGTTTTTTGCCCATGTCTAGGGGAAACTCTCAAATAGATTTAACAGATGGTGACCAAGACTCAGTGAAGAAGATTCCCTTGAAGGCATCCAGCTTGAGAAACAATGAGATTGAAGGTGCTTATAACCAGGCAATGATTGGATCAAGAAAGCAGGTTGAGAGAAAGAGAAGTACAGCTGAGAAAAATGTCAGCTTGAGTGTTCTCCAGCAATATTTTTCTGGTAGTCTAAAGGATGCAGCAAAGAGCATTGGTGTTTGTCCTACAACTCTGAAAAGGATATGCAGGCAACATGGCATTTCCAGATGGCCATCCCGCAAAATAAATAAAGTGAATCGTTCATTAAAGAAAATTCAGACTGTGCTTGACTCTGTTCAGGGGGTGGAAGGAGGGCTGAAGTTCGACCCATCTAGCGGGGGATTTGTGGCAGGAGGTTCAATCATTCAAGAATTTGATGCACACGGTAGTCTTTTATTCCCTGAGAAGAGTATGCGTGTACAAAATCCTGAGCATGTTGCACAAGGTGCAGTGTCAGTACCTTGTAGTGAAGGAGAGAATCCAGCGATGAAGTTGGAGGATAATGATGTTTATTTGGCAGATAACCGGCTTGTGCCCTCAAGAGGTGTACTGATCCCAAATCCTCGCAAGGGAGAATTGAAGAAAGTCAATGCTTCTTCTGTTGATTGTGCTGAAGATTCAAAATCCATGGCCTTGGATGATGGCTCATGCCAAACAGCCAAGGCTCAGGATTGCCCTGAGAATGCATGTCCAGGTTCAGTTCCTAAGAAAGAAGGAACTCAATGGGGTCTGAACAAGGATGGTCAGGGAGTAAACAATTCTGGCCTTGATAACTCTTGGAGTTCAAGCTCCTTGATTGCTGATGAGATGAAAAATGTTGTGGATGGGGAGAATGGGGTTGTTGATCATAACCATCTTACTTCAAGCATGACTGACTCATCCAATGGCTCTGGTTCAATGATCCATGACAGTTCATCAGGCTCTCAAAGCTTTGAGAACAAGAAGTACTCCAGAGGCAAATCAAGCCCTGTTGATAGTGGATCAAAAATGATTGTGAAAGCCACCTATAAAGAAGATACCATTCGTTTCAAGTTTGATCCATCTGCAGGTTGTTGGCAGCTATACGAAGAAGTAGCAACAAGATTCAAATTACAAAATGGGTCATTCCAGCTTAAATATTTAGATGATGAAGAGGAATGGGTGATGTTGGTAAATGACTCAGATCTGCAAGAGTGCGTAGAAATATTGGATGATATTGGCACGCGGAGTGTGAAGTTTCTTGTTCGTGATATGCCCTGCGTGTTAAGCAGCTCTGGCAGTAGAGAAAGTTGCTTTTTGGGAGGCTCGTAG 2988 0.4203 MEYPFSPRGKDSGYWMSPRAQLEGSTSLDGGTRNSISEEMLNTFSELMNFDTYAGWCNSSSTTDQNLANGLSSFTSVPYASPDRFNLMEQCSGPFFTSDVNRNYDDIRSFPSSREKVVFQQMDTQFGFSDDANDADNLNSKEHVNESFQQVDNLEMGNYIISRPPGWSLDERMLRALSLFKDSAGGGILAQVWVPVKHGDQFILTTSEQPYLLDQLLAGYREVSRTFTFSAEGRPGSFPGLPGRVFISKVPEWTSNVGYYNENEYLRVEHAKKHEVRGSIAVPVFDSHSEFPCCAVLELVTTKEKPDFDRELEIVCHALQVVDLRTTTPPRLLPQSLSNNKRAALIEIIDVLRAVCHAHSLPLALTWIPCSYTEEIGNGNVRLQVKEGYSSSSEKWVLCVEESACYVNDRTMEGFVHACAEHHLEEGQGIAGKAIQSNHPFFYPDVKAYNIGEYPLVQHARKYNLNAAVAIRLRSTFTNDDDYILEFFIPVNMRGSSEQQLLLDNLSGTMQRICRSLRTVTDVELSGISGSQMEFQNEEVCGFLPMSRGNSQIDLTDGDQDSVKKIPLKASSLRNNEIEGAYNQAMIGSRKQVERKRSTAEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPSSGGFVAGGSIIQEFDAHGSLLFPEKSMRVQNPEHVAQGAVSVPCSEGENPAMKLEDNDVYLADNRLVPSRGVLIPNPRKGELKKVNASSVDCAEDSKSMALDDGSCQTAKAQDCPENACPGSVPKKEGTQWGLNKDGQGVNNSGLDNSWSSSSLIADEMKNVVDGENGVVDHNHLTSSMTDSSNGSGSMIHDSSSGSQSFENKKYSRGKSSPVDSGSKMIVKATYKEDTIRFKFDPSAGCWQLYEEVATRFKLQNGSFQLKYLDDEEEWVMLVNDSDLQECVEILDDIGTRSVKFLVRDMPCVLSSSGSRESCFLGGS 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3986 995 ProSiteProfiles PB1 domain profile. 895 977 IPR000270 GO:0005515
Bisa02g3986 995 PANTHER PROTEIN NLP8 110 988 IPR045012 GO:0003700
Bisa02g3986 995 MobiDBLite consensus disorder prediction 848 890 - -
Bisa02g3986 995 MobiDBLite consensus disorder prediction 847 892 - -
Bisa02g3986 995 Pfam RWP-RK domain 603 651 IPR003035 -
Bisa02g3986 995 SMART PB1_new 895 977 IPR000270 GO:0005515
Bisa02g3986 995 Pfam PB1 domain 898 976 IPR000270 GO:0005515
Bisa02g3986 995 SUPERFAMILY CAD & PB1 domains 886 979 - -
Bisa02g3986 995 MobiDBLite consensus disorder prediction 802 823 - -
Bisa02g3986 995 ProSiteProfiles RWP-RK domain profile. 583 671 IPR003035 -
Bisa02g3986 995 CDD PB1_NLP 896 976 IPR034891 -
Bisa02g3986 995 Gene3D - 891 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3986 Bisa-ChrBisa02 94204621 94209823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3986 1 985 NLP Transcription Factor Family AT2G43500 49.650 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bisa02g3986 PB1 1.3e-17 CL0072