Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3970 ATGGAGTCAGATCTTGAGCAACACCGTTCAATGTTACATGATCATCAGCAGCAGCAGCAGCAACAGCAGCAGCAGATGAATTCTGGATTGACACGTTACCGATCGGCACCAAGCTCCTTTTTGACGAATATCATCGACAAGGAGTTCTACGAGGATATGTTTCACAGGCCTTCAAGCCCAGAAACAGAGCGAGTTTTTTCAGGGTTCATAAATAGCCTCGATGGTGGTGGTGAGGCAGATGAGTCACCTCCTCAATACCTCTCACCTGTTGGACAAAATTCTGCAGTGAAGGAAGAGATTGACCAACAGTCTCAGGTTATGCCTTCCATCAATAATGAATCTCTAATTCTTCAGCAGCACCAAAATAATATTAATACTTTTGCTACTGCTACTCAAAATCTTTACCAAAGCTCAGGTCGACCTCCTTTGCCAAATCACACCCTCACCTCATCAGCCATGGAAGGAGCATATTCAGTGGGACTTCATCATCGATTGCCACATATGAAGACCGGTGATGCAAATTCCAATATAATCAGGCATAATAGCTTACCTGCTGGATTCTTTTCCCAAATCAACATTGATAGCGGCTATGCTGCAGGGAGAGGCATTAACGAAGAAGCAAACTTTTCTTCTGCTAGGACGTTAAGGAATCCACAAAAGTACTCGACAGGCCTAATGGCATCCATAGCTGAAACTGGGGGAAAAAGCAACAGAGAAAATAAACCAGATAGTGAATCTTTTGGTGAAAGCCACGGTAATGAGTTTATGACAGGTTTTCCTGCAGGTCCTTGGGATGATTCTGTAATTATGTCTGACAATTTTGGTGGACTAAAAGGATTCAGAGATGAAGATGCAAAAACGTATTCTGAGACTCAGAATGAGACAGGAACAGGAAGCCAGCCTCGTCCTGCTCCTCTGGCCCATCACTTGAGTTTGCCGAAAACCTCAGCGGAAATGGCAGCCATTGAGAAGTTCCTGCAGTTCTCAGATTCTGTTCCCTGTAAGATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCAGAAGCATTGCAGAGAGGGTTAGAAGAACAAAGATCAGTGAGCGAATGAGGAAATTACAGGATCTGGTCCCAAACATGGACAAGCAAACAAACACATCAGACATGTTGGACTTGGCTGTCGACTACATAAAAGACCTTCAAAAGCAGGTTCAGGAAGACAAGGTGGGTGCGCAAAAGCACTTTCCTTTTGAGGGGATGAAGGAGGAGGGAGTAATTTGA 1257 0.4487 MESDLEQHRSMLHDHQQQQQQQQQQMNSGLTRYRSAPSSFLTNIIDKEFYEDMFHRPSSPETERVFSGFINSLDGGGEADESPPQYLSPVGQNSAVKEEIDQQSQVMPSINNESLILQQHQNNINTFATATQNLYQSSGRPPLPNHTLTSSAMEGAYSVGLHHRLPHMKTGDANSNIIRHNSLPAGFFSQINIDSGYAAGRGINEEANFSSARTLRNPQKYSTGLMASIAETGGKSNRENKPDSESFGESHGNEFMTGFPAGPWDDSVIMSDNFGGLKGFRDEDAKTYSETQNETGTGSQPRPAPLAHHLSLPKTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQKQVQEDKVGAQKHFPFEGMKEEGVI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3970 418 MobiDBLite consensus disorder prediction 14 31 - -
Bisa02g3970 418 MobiDBLite consensus disorder prediction 231 253 - -
Bisa02g3970 418 Coils Coil 5 25 - -
Bisa02g3970 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 400 IPR036638 GO:0046983
Bisa02g3970 418 FunFam Transcription factor bHLH130 family 343 406 - -
Bisa02g3970 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 392 IPR011598 GO:0046983
Bisa02g3970 418 MobiDBLite consensus disorder prediction 68 92 - -
Bisa02g3970 418 MobiDBLite consensus disorder prediction 1 31 - -
Bisa02g3970 418 Pfam Helix-loop-helix DNA-binding domain 347 393 IPR011598 GO:0046983
Bisa02g3970 418 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 397 - -
Bisa02g3970 418 Gene3D - 343 406 IPR036638 GO:0046983
Bisa02g3970 418 SMART finulus 348 398 IPR011598 GO:0046983
Bisa02g3970 418 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3970 Bisa-ChrBisa02 93989192 93991456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3970 1 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.518 1.62e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g3970 HLH 1.1e-09 No_clan