Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3954 ATGGGAAGCTGCATATCCACGGCGGGCAAGTCGTTCCCTCGCAGGAGGTCCAAGGAGAACGGCAAATGCCCCCACACCAAATGTGACAGCTACCGCTCCTACGCGCCGCCGCCGCCGCCGCCGCACCACAACTCCACCCTCCGCCCCATCAACGTCGTGGACCACCCCGAGCCGGGCGACATCTTCCACAAGTACGAGTTCGGCAAGGAGCTGGGACGCGGCGAGTTCGGCGTCACGCACCGATGCGTGGAGAGGGAAACAGGGCAGGCCTACGCGTGCAAGAAGATTTCGAAGACGAAGCTTCGGACGGAGATCGATATTCAGGACGTGAAGAGAGAGGTGCAGATCATGAGGCATTTGCCCAAGCATCCCAATATCGTCAACTTTAAGGAGGCGTACGAGGACAAGGAGGCTGTGTACCTCGTCATGGAGCTCTGTGAAGGTGGCGAGCTCTTCGATAGAATCGTCTCTAAAGGCCATTACACCGAACGCGCCGCCGCCAGTGTCGTCAAGACAATTCTTGAAATTTGCAAGGTTTGCCATGACCATGGGGTGATACACAGGGACTTGAAGCCTGAGAATTTCTTGTTTTCAGATGCAAGTGAGAGTGCTCCCATAAAGGCAATTGATTTTGGGCTTTCCACTTTTTATGAACCTGGGCAGAGATTCAATGAGATTGTTGGAAGTCCCTATTACATGGCTCCAGAGGTGTTAAGACGAAACTATGGGCCAGAAATTGATGTGTGGAGCGCAGGTGTTATTCTTTATATTCTACTTTGTGGGGTTCCACCATTTTGGGCAGAATCTGAGGAAGGAATAGCACAGGCAATCATCAAGGGAAACATAGATTTTGTAAAAGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAGATCACTGGTTAAAAAGATGCTTGATCCAAATCCGTACAGCCGATTAACTGGTCAAGAAGTTCTTGACCATCCGTGGATACAAAACAAGGACAACGGCCCAAATGTTAATCTAGGAGACCATGTGAGAATGAGGATCAAGCAATTCTCCTTGATGAACAAGTTCAAGAAGAAAGTACTTAGAGTGGTGGCAGATAGCCTTCCGGTTGAGCAAATAAATGGGATAAAGAAGATGTTCGACATGATGGACAAGGACAAAAATGGAAACTTGACGTTCGAAGAGCTCAGAGATGGCCTCTCTAGAATTGGACACACTCTTCCTGACCCTGAAGTGCAGATGTTATTGGAGGCAGCAGACATAGATGGAAACGGCACACTGAACTGTGAAGAGTTTATCACAATGAATGTTCATCTGGGGAAGATCGGGAGTGACGAGCATCTCTCTGAAGCTTTCTCTTACTTCGACAAGAATCAGAGTGGATATGTGGAGTTTGATGAGTTGAGAGAAGCCTTGTTGGATGACGACTTAGGTCTCACAAGCGACCAGGTGATTCATGACATCATATTTGAAGTCGACTTGGATAAGGATGGTCGAATCAGTTATGAGGAGTTCAAGGCGATGATGAAGACAGGACCAGATTGGAAAATGGCTTCACGCCAGTATTCAAGAGCAATGCTGAATGCGTTGAGCTTCAAGATGTTCAGTAACAAATCGGTCAAGTGTGCCTAA 1617 0.4836 MGSCISTAGKSFPRRRSKENGKCPHTKCDSYRSYAPPPPPPHHNSTLRPINVVDHPEPGDIFHKYEFGKELGRGEFGVTHRCVERETGQAYACKKISKTKLRTEIDIQDVKREVQIMRHLPKHPNIVNFKEAYEDKEAVYLVMELCEGGELFDRIVSKGHYTERAAASVVKTILEICKVCHDHGVIHRDLKPENFLFSDASESAPIKAIDFGLSTFYEPGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIKGNIDFVKDPWPKVSEEARSLVKKMLDPNPYSRLTGQEVLDHPWIQNKDNGPNVNLGDHVRMRIKQFSLMNKFKKKVLRVVADSLPVEQINGIKKMFDMMDKDKNGNLTFEELRDGLSRIGHTLPDPEVQMLLEAADIDGNGTLNCEEFITMNVHLGKIGSDEHLSEAFSYFDKNQSGYVEFDELREALLDDDLGLTSDQVIHDIIFEVDLDKDGRISYEEFKAMMKTGPDWKMASRQYSRAMLNALSFKMFSNKSVKCA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3954 538 Pfam Protein kinase domain 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3954 538 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Bisa02g3954 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 500 - -
Bisa02g3954 538 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Bisa02g3954 538 SUPERFAMILY EF-hand 352 518 IPR011992 -
Bisa02g3954 538 ProSiteProfiles EF-hand calcium-binding domain profile. 475 510 IPR002048 GO:0005509
Bisa02g3954 538 FunFam Calcium-dependent protein kinase 1 67 150 - -
Bisa02g3954 538 Pfam EF-hand domain pair 383 430 IPR002048 GO:0005509
Bisa02g3954 538 ProSiteProfiles Protein kinase domain profile. 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3954 538 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Bisa02g3954 538 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Bisa02g3954 538 Pfam EF-hand domain pair 441 505 IPR002048 GO:0005509
Bisa02g3954 538 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Bisa02g3954 538 MobiDBLite consensus disorder prediction 12 26 - -
Bisa02g3954 538 FunFam calcium-dependent protein kinase 13 151 331 - -
Bisa02g3954 538 Gene3D - 332 506 - -
Bisa02g3954 538 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Bisa02g3954 538 Gene3D Phosphorylase Kinase; domain 1 67 150 - -
Bisa02g3954 538 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Bisa02g3954 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Bisa02g3954 538 CDD STKc_CAMK 64 322 - -
Bisa02g3954 538 SMART serkin_6 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3954 538 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Bisa02g3954 538 Gene3D Transferase(Phosphotransferase) domain 1 151 331 - -
Bisa02g3954 538 FunFam Calcium-dependent protein kinase 7 332 508 - -
Bisa02g3954 538 SMART efh_1 370 398 IPR002048 GO:0005509
Bisa02g3954 538 SMART efh_1 442 470 IPR002048 GO:0005509
Bisa02g3954 538 SMART efh_1 406 434 IPR002048 GO:0005509
Bisa02g3954 538 SMART efh_1 479 507 IPR002048 GO:0005509
Bisa02g3954 538 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Bisa02g3954 538 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3954 Bisa-ChrBisa02 93669146 93672032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3954 1 530 EF-hand Containing Proteins AT2G31500 68.392 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa02g3954 Pkinase 3.8e-76 CL0016