Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3946 ATGGGGTTCTCAGTTAGACATCTCTTAACCTCGTTTTTGAAACTTGCAGTTTTATTATCATATCTATGGTCCTCAGTTTGGGGTCTTGGGTCCATGTCTTCCATTGCCATATCTTATGGTGAAAAAGGTTCTGTGTTTTGTGGTCTGCGACCAGATGGGTCTCATACTGTGACCTGTTACGGATCAAACTCAGCCATAGTCTATGGAATACCGACCCATTTCCCACTTCTGGGTCTAAGTGCAGGCGATGGCTTTGTGTGTGGACTCCTTGTGAGTTCTTCCCAACCTTATTGTTGGGGAAGCAGTGGCTATATTGAAATGGGTGTTCCACAACCTATGACTAAAGGAGCAGAATACCTAGAAATCAGTGCTGGAGATTACCATGTTTGTGGGTTGCGGAAACCTTTGACAGGAGGACATAGAAACATGTCTCTTGTTGATTGCTGGGGTTACAACATGACCAAGAACTATGTTTTTGATGGCCAGATTCAGTCAATCTCAGCAGGTTCTGAATTCAACTGTGGGTTATTTTCCCAGAACAGAACTGTGTTCTGCTGGGGTGATGATACTAGTAGCAGGGTGATCAGTTTAGTCCCAAGAGACAAGAGATTCCAGAAGATTTCTGCAGGTGGGTATCATGTGTGTGGAATCTTAGAAGGGGTGAGTTCCAAAACTGTGTGTTGGGGAAGGAGTTTGAGTATTGAGGAAGAAATTTCAGTGACACATTCTGGTCAAGGGCAAGGCAATAATGTTGATTTGGCTCCAAGTGAACCCATGCTTTCTGTAGTTGGAGGAAAGTTTCACTCTTGTGGGATTAAGAGTTATGATCATGGGGTGATTTGTTGGGGCTTTTTTATCAAAGGAAGCACCCCAACTCCTAGTGGGATCAAGGTGTTTGAGATTGCCGCTGGAGATTATTTCACTTGTGGAGTGCTTGCTCAGAAATCTCTTATGCCTGCTTGTTGGGGTGTTAGCTTCCCTACCTCGCTTCCATTGGCCGTTTCGCCTGCACTCTGCAAGCCGAATCCATGTCCTCCTGGTTTCTATGAAATTCAACAGCCAAAGGGTCTTTGTAAGTCTCCAGATTCTCACGTTTGCATGCCATGCAGTGCAGGTTGTCCTAATGAAATGTATCAGAAAAGTGAGTGCAGTTATAAATCCGACAGACAATGTGAATACAATTGCTCCATTTGTTCCTCCCCTGAATGCTTCTCAAATTGCTCTTCTTCAGATTCCAGTGCCACCATGGGGAAAAAAGATGAAAAATTTTGGTCTATGCAGTTGCCAGTTCTTATTGCAGAGATTGCTTTTGCTGTTTTCTTTGTTAGTATTGTATCCTTAACTGCTGCTTTATATGTTCGTTACAAGCTACGAGGTTGTCGGTGTACCATGGAAGGATCAAACGTGAAGAGACTTCAAGGTAGCAATTCTTCCCTCCAAAAAGAGAACAGCAAGATCTGTCCAGACTTGGAGGAGCTCAAGATCAGGAGGGCTCAGACATTCACCTATGAGGAGCTCGAAAGGGCAACAGGCGGGTTCAAAGAAGAATCCATAGTTGGTAAGGGAAGCTTTTCGTGTGTATTCAAAGGTGTGTTGAAAGATGGAACTATTGTAGCTGTTAAAAGGGCCATAATGTCTCCCAACATGCAGAAGAATTCCAAAGAGTTTCACACTGAGCTTGACTTGCTCTCCAGATTGAACCATGCCCATTTGCTCAACCTCCTAGGCTATTGTGAAGAAGGCGGTGAAAGGCTTCTTGTTTATGAGTTCATGGCTCATGGCTCCTTGCACCAACACCTCCATGGGAAAGACAAGGCTTCCAAAGAACAATTGGATTGGGTTAGAAGAGTAACAATTGCAGTTCAAGCTGCTAGAGGAATTGAATATCTGCATGGCTATGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCTTCAAACATCCTTATTGATGAAGAACATAATGCTAGAGTTTCTGATTTTGGCTTGTCACTGTTAGGCCCTGCAGATAGTAGCTCTCCATTAGCTGAACTACCTGCAGGCACACTCGGCTATCTCGATCCTGAATACTACAGGCTTCATTACCTTACCACAAAATCTGATGTCTATAGCTTTGGTGTTTTACTCTTGGAGATTCTAAGTGGTAGAAAGGCCATTGACATGCAATATGAAGAAGGGAACATAGTTGAATGGGCTGTCCCTTTGATCAAGTCAGGCGATATCGCCGCAATTCTAGACCCAGTTCTGAAACCTCCTTCTAATCTTGAAGCATTGAAGAAGATCTCTAATGTGGCTTGTAAATGTGTGAGGATGAGAGGGAAGGAGAGGCCATCGATGGACAAAGTGACAACGACTTTGGAGCGAGCTCTCGTGCAGCTTATGGGAAGTCCAAGCAATGAGCAGCCAATTTTGCCCACTGAGGTGGTGTTGGGAAGCAACAGATTACACAAGAAGTCGTCACAGAGATCTTCAAACAAGTCAGCTTCAGAGACTGATGGGGGAGATGGTGAGGATCAAGGGTTTGAGTTCAGAGCACCCTCATGGATAACTTTCCCAAGTGTTACTTCTTCTCAGAGAAGGAAGTCGTCAGTGTCAGAAGGTGACGTTGATGGGAAAAATGCAGAAGCCAGGAACTTGGGAAACAATGGCGTTGGTGGTGGGGACGTTTTAGTGAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGGCTGTTCTTGCAGCACAACTTCTGA 2739 0.4465 MGFSVRHLLTSFLKLAVLLSYLWSSVWGLGSMSSIAISYGEKGSVFCGLRPDGSHTVTCYGSNSAIVYGIPTHFPLLGLSAGDGFVCGLLVSSSQPYCWGSSGYIEMGVPQPMTKGAEYLEISAGDYHVCGLRKPLTGGHRNMSLVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDDTSSRVISLVPRDKRFQKISAGGYHVCGILEGVSSKTVCWGRSLSIEEEISVTHSGQGQGNNVDLAPSEPMLSVVGGKFHSCGIKSYDHGVICWGFFIKGSTPTPSGIKVFEIAAGDYFTCGVLAQKSLMPACWGVSFPTSLPLAVSPALCKPNPCPPGFYEIQQPKGLCKSPDSHVCMPCSAGCPNEMYQKSECSYKSDRQCEYNCSICSSPECFSNCSSSDSSATMGKKDEKFWSMQLPVLIAEIAFAVFFVSIVSLTAALYVRYKLRGCRCTMEGSNVKRLQGSNSSLQKENSKICPDLEELKIRRAQTFTYEELERATGGFKEESIVGKGSFSCVFKGVLKDGTIVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKDKASKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIAAILDPVLKPPSNLEALKKISNVACKCVRMRGKERPSMDKVTTTLERALVQLMGSPSNEQPILPTEVVLGSNRLHKKSSQRSSNKSASETDGGDGEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVDGKNAEARNLGNNGVGGGDVLVSLEEEIGPASPQERLFLQHNF 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3946 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Bisa02g3946 912 Gene3D - 76 336 IPR009091 -
Bisa02g3946 912 SMART serkin_6 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3946 912 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Bisa02g3946 912 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 343 391 IPR001368 GO:0005515
Bisa02g3946 912 FunFam serine/threonine-protein kinase-like protein CCR1 483 590 - -
Bisa02g3946 912 SUPERFAMILY RCC1/BLIP-II 251 327 IPR009091 -
Bisa02g3946 912 ProSiteProfiles Protein kinase domain profile. 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3946 912 FunFam Serine/threonine-protein kinase-like protein CR4 28 195 - -
Bisa02g3946 912 SUPERFAMILY Protein kinase-like (PK-like) 496 786 IPR011009 -
Bisa02g3946 912 SUPERFAMILY RCC1/BLIP-II 30 232 IPR009091 -
Bisa02g3946 912 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 10 912 - -
Bisa02g3946 912 FunFam Receptor protein kinase CRINKLY4 591 793 - -
Bisa02g3946 912 Gene3D Transferase(Phosphotransferase) domain 1 591 799 - -
Bisa02g3946 912 Gene3D Phosphorylase Kinase; domain 1 484 590 - -
Bisa02g3946 912 MobiDBLite consensus disorder prediction 813 830 - -
Bisa02g3946 912 MobiDBLite consensus disorder prediction 812 884 - -
Bisa02g3946 912 Pfam Protein tyrosine and serine/threonine kinase 516 785 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3946 Bisa-ChrBisa02 93601079 93603817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3946 3 912 Receptor kinase-like Gene Family AT3G59420 68.593 0.0 1258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bisa02g3946 PK_Tyr_Ser-Thr 8.6e-45 CL0016