Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3934 ATGAAAATTCAGTGCGATGTGTGTGAGAAAGCGCCGGCGACGGTGATTTGTTGCGCCGACGAGGCTGCTTTGTGTGCGAAATGCGACATTGAAGTTCATGCTGCGAACAAGCTTGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCCAACAAGCTTCCCACATGTGACATCTGCCAAGACAAGGCAGCTTTCATATTCTGTGTAGAAGATAGGGCACTGTTCTGTCAAGATTGCGATGAACCAATCCATTCAGCTGGCAGCCTTTCTGCAAACCACCAGCGCTTCCTTGCAACCGGTATCCGAGTGGCCTTGAGTTCCAACTGCACCAAAGAGAACGAAGGAGGCTGCTTAGAGCCACCGAATCGGAATGCACAGCCACCTTATGCAAAAATCTCCCCTCCGCCTCAGCAAGTTCCTACCTTCACATCCTCTTGGGCTGTTGATGACTTGTTGGACATCACTGACTTTGAGTCACCTGAGAATGAGAAGAAGGAATCACTTGAGTTTGGAGAGCTGGAATGGTTGTCAGAGGTGGGTCTTTTTGGAGAACAATTTCCTGAGGCCTTAGCTGCAGCTGAAGTCCCACAGCTTCCAGTAACACAAACTAGCAATGTGGCCTCATACAGGCCCTCTAAATCCTATATGTCTCTCAAAAAGCCTAGGATTGAATTTGAAGACGATGATGAGCACTTCACTGTACCTGATCTTGGCTGA 720 0.4917 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSNKLPTCDICQDKAAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVALSSNCTKENEGGCLEPPNRNAQPPYAKISPPPQQVPTFTSSWAVDDLLDITDFESPENEKKESLEFGELEWLSEVGLFGEQFPEALAAAEVPQLPVTQTSNVASYRPSKSYMSLKKPRIEFEDDDEHFTVPDLG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3934 239 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bisa02g3934 239 CDD Bbox1_BBX-like 5 47 - -
Bisa02g3934 239 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Bisa02g3934 239 Gene3D Classic Zinc Finger 1 123 - -
Bisa02g3934 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa02g3934 239 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bisa02g3934 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa02g3934 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Bisa02g3934 239 CDD Bbox1_BBX-like 57 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3934 Bisa-ChrBisa02 93511712 93513120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3934 1 162 Orphan Transcription Factor Family AT1G06040 64.671 8.62e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bisa02g3934 zf-B_box 6.2e-08 No_clan