Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3924 ATGGAATCTGCGACTCCACCCTCGCCGGAGCTTCACCTGAACGACCTCCGAGCACTCAAAGTCCTCGGCGAAGGTGGCATGGGCACCGTCTTCCTCGTCCACGACATCCTCTCTGATCCCTCTGCCCTCTCCCCTTTCGCCCTCAAGCTCCTCCACAAATCCTCCATTAATTCCTGCCACTCCAACCTCGACGACGCCGAGCGCCGAGCCCGCTGGGAAATCCACGTTCTCACTCGCTTGTCCCACCCCTTCCTCCCTTCCCTCCTCGGCACTATTGAATCCGATCAATTTCTCGGTTGGGCCACCCCTTATTGCCCCGGCGGCGACCTCAACGTCCTCCTCCACCGCCAAATTGACCGTGTCTTCTCTCCCGCCATCATCCGCTTCTACCTGGCTGAGATCGTCTGCGCTCTTGAGCATCTCCACGGCATGGGCATTGCCTACCGCGATTTGAAGCCAGAGAACGTACTCATTCAGCAATCCGGCCACGTCACCCTAACCGATTTCGATCTCTCTCTTAAGCTCGCACCCAAAACCATCAGAACCATCATTTCAACAACTCTGCCAGCGGAGGAAATTATGCCGGACAACGGCCGGAAAGTTCGCCGGAATTTCACACGGTGGTTCCCCGCCGCACAGAATAACAAGAAAGGGTTGAAGAAGGCGGCCCGAGTCAGCCCCGTGAGTCGACGGAAGCCGAGTTTCTCGGACGGTGAGAAGTCTAACTCGTTCGTGGGCACAGAGGAGTACGTGTCGCCGGAGGTAGTCCGCGGCGACGGTCACGAGTTCGCCGTTGATTGGTGGGCCCTGGGGATATTGGCGTACGAGATGTTATACGGTACGACGCCGTTTAAGGGGAATAACCGAAAGGAAACATTCCGAAATGTTTTAGTGAAATCACCGGAATTCATTGGGAAGCGGACTGTGCTAACCGACTTGATCGAACGGCTGCTGGAGAAGGACCCCACAAAACGATTGGGGTACGCGAGAGGCGCGTGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTGAGCTGGAACCTATTGACGGAGGTGGTACGGCCGCCGTTCATTCCGCCGAGAGAAGACGGCGACTTGACCGTTGGCGGGATGGACGTAAGTGATTACTTCCGGAAATTGAAATCGCCTCCGTCGTTCCCTCCTTCGCCGTCTTCTGAGTATCAGAGGAATTTGTCGTTTGCAGAGTTTTGA 1212 0.5635 MESATPPSPELHLNDLRALKVLGEGGMGTVFLVHDILSDPSALSPFALKLLHKSSINSCHSNLDDAERRARWEIHVLTRLSHPFLPSLLGTIESDQFLGWATPYCPGGDLNVLLHRQIDRVFSPAIIRFYLAEIVCALEHLHGMGIAYRDLKPENVLIQQSGHVTLTDFDLSLKLAPKTIRTIISTTLPAEEIMPDNGRKVRRNFTRWFPAAQNNKKGLKKAARVSPVSRRKPSFSDGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGNNRKETFRNVLVKSPEFIGKRTVLTDLIERLLEKDPTKRLGYARGACEIKEHEFFRGVSWNLLTEVVRPPFIPPREDGDLTVGGMDVSDYFRKLKSPPSFPPSPSSEYQRNLSFAEF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3924 403 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3924 403 ProSiteProfiles AGC-kinase C-terminal domain profile. 342 403 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bisa02g3924 403 Gene3D Transferase(Phosphotransferase) domain 1 109 185 - -
Bisa02g3924 403 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Bisa02g3924 403 SUPERFAMILY Protein kinase-like (PK-like) 13 395 IPR011009 -
Bisa02g3924 403 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Bisa02g3924 403 Gene3D Phosphorylase Kinase; domain 1 15 108 - -
Bisa02g3924 403 Pfam Protein kinase domain 19 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3924 403 Pfam Protein kinase domain 237 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3924 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bisa02g3924 403 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3924 403 PANTHER FLIPPASE KINASE 1-RELATED 10 361 - -
Bisa02g3924 403 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Bisa02g3924 403 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Bisa02g3924 403 MobiDBLite consensus disorder prediction 381 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3924 Bisa-ChrBisa02 93397775 93398986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3924 11 403 AGC Kinase Gene Family AT3G20830 62.069 3.89e-167 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa02g3924 Pkinase 2.3e-29 CL0016