Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3923 ATGGGCTCAATGAACTCAAACAACTGGCTCTCCTTCCCTCTTTCTCCTACTCATTCTTCCTTGCCTCCTCAACTCCAAGCTTCCCAGTCCCATCATTTTTCTCTTGGCTTAGTCAATGACACCATGGAAAACCCTTTCCAAAACCACGATTGGAATTTGATGAATGCTCAGGGGAGCAACGTTAACGAAGTGCCGAAGGTTGCAGATTTTCTAGGAGTGGGGAAGTCTGAGAACCACTCAGATCTTGCAGCCTTTAATGAAATACAGTCGAATGATTCGGGTTACCTATTCACAAACAACAGTCTGGTGCCGATTCAAAACTCAGTGGTGGCCACATCTGCCAACTTCGAGTATCAAGAAAACAACGCCAACAGTAACTTGCAGTCCTTGACATTATCCATGGGAAGTGGTAAGGATTCCACATGTGAAACCAGTGGTGACAATAGCACTAACACTGCCGTTGAAGCAGCTGCACCTAGAAGAACCTTGGATACATTCGGCCAGAGAACATCGATTTATCGTGGTGTAACAAGACATAGATGGACCGGAAGGTATGAGGCTCATCTTTGGGATAACAGCTGTAGAAGGGAAGGGCAATCAAGGAAGGGACGCCAAGGTGGGTATGACAAAGAAGAGAAAGCAGCTAGGGCCTATGATTTAGCAGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCAATCAGTAACTACGAGAAGGAACTGGAGGAGATGAAGCACATGACAAGACAAGAATTCGTGGCCGCCATACGGAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGGGTCACAAGACATCACCAACATGGAAGATGGCAAGCAAGGATCGGTAGAGTTGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGCACTGAGGAAGAAGCTGCGGAAGCATACGACATAGCAGCGATAAAGTTCAGAGGACTAAACGCAGTGACAAACTTTGACATGAGCCGTTACGACGTGAAAGCCATACTGGAAAGCAACACGCTTCCCATAGGAGGAGGAGCCGCCAAAAGACTGAAAGAAGCACAAGCTCTAGAAAGTTCCAGAAAAAGAGAGGAAATGATAGCACTAGGCTCGGGCTTTCAGTACGGAAGCAGCAGCAACAGCAGCAACAAGCTTCAACCTTACCCATTGATGCAGCAACAGTTCGATCATCATCAGACACAGCCATTGCTAAGCCTACAGAACCAAGAGATCTCTCAGTATAGCTCACTTCATCATCATCATCATCCATATATACAGACCCAGCTTCAGTTGCACCAGCAAAGTGGGTCGTCTAGTTATGGCTTCCATCAGTCGGGGAACAATAATAGTGGTACTACTGCTCAGTTGTACAATGGGTATCTTCAGAACCACCCGTCGTTGCTTCAAGGTTTGATGAACATGGGGACGTGTTCGTCGACGTCGGTGATGGAGAACGACGGAGGGTCGAGTGGGAGTTACAGTACTGGAGGAGGGTTCATGGGGATGGCCTCCAACACGACGTCGGGTAACACGGAGGAGCTGGGGCTGGTGAAGGCGGAGAACTATAGCATGCCGGCCGGAGGATACGGAGGCTGGTCGGCGGAGTCCAACGCCGCTCTTTTTACCATGTGGAATGACTGA 1650 0.4842 MGSMNSNNWLSFPLSPTHSSLPPQLQASQSHHFSLGLVNDTMENPFQNHDWNLMNAQGSNVNEVPKVADFLGVGKSENHSDLAAFNEIQSNDSGYLFTNNSLVPIQNSVVATSANFEYQENNANSNLQSLTLSMGSGKDSTCETSGDNSTNTAVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSGFQYGSSSNSSNKLQPYPLMQQQFDHHQTQPLLSLQNQEISQYSSLHHHHHPYIQTQLQLHQQSGSSSYGFHQSGNNNSGTTAQLYNGYLQNHPSLLQGLMNMGTCSSTSVMENDGGSSGSYSTGGGFMGMASNTTSGNTEELGLVKAENYSMPAGGYGGWSAESNAALFTMWND 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3923 549 ProSiteProfiles AP2/ERF domain profile. 271 329 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 FunFam AP2-like ethylene-responsive transcription factor ANT 171 237 - -
Bisa02g3923 549 SUPERFAMILY DNA-binding domain 270 331 IPR016177 GO:0003677
Bisa02g3923 549 ProSiteProfiles AP2/ERF domain profile. 172 235 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 FunFam AP2-like ethylene-responsive transcription factor 270 331 - -
Bisa02g3923 549 Pfam AP2 domain 172 227 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 Pfam AP2 domain 272 321 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 SUPERFAMILY DNA-binding domain 171 237 IPR016177 GO:0003677
Bisa02g3923 549 CDD AP2 270 331 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 70 426 - -
Bisa02g3923 549 SMART rav1_2 271 335 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 SMART rav1_2 172 241 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 CDD AP2 171 237 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 Gene3D AP2/ERF domain 172 237 IPR036955 GO:0003700|GO:0006355
Bisa02g3923 549 Gene3D AP2/ERF domain 271 331 IPR036955 GO:0003700|GO:0006355
Bisa02g3923 549 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Bisa02g3923 549 PRINTS Ethylene responsive element binding protein signature 311 331 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3923 Bisa-ChrBisa02 93364748 93367529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3923 4 549 AP2-EREBP Transcription Factor Family AT1G51190 63.575 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa02g3923 AP2 2.5e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3923 02 93364748 93367529 Bisa02g3923 02 93364748 93367529 ECH