Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3918 ATGACTGATCCCTACTTCTCCAATAACTTCAATGGTTGGTTTGACCTTAATTATCCTAATTGCCTTTTTTCTTCTTCTTCATCATCATCATCACCGTCATCATCATCTTGCTCCAATCCACCTCTTTGTCATCAGTACCATCTACCCTTACCATCTTCTCCTCCTTTAAGAGAAGCCCTTCCTCTCCTTAACCTTAGCCCTAGGAGACCTGAGGAAGATCCAGAAACTTCTTGTACAGTCATGGAAGTGGACAAAAAGGACGATGAAACTCTGACGGTGGCTTTACACTTAGGGCTTCCACCAAGCATGGAATCAACTGAATTATTAGTTTCAGAGAAAGAAGAAGATGAAGTGACCGTTGCTTCTGCGTGTGCACCGAGTGGAATGAATAGGGGTCAGTACTGGATCCCTACCCCTGCTCAGATTCTGATCGGTCCAACACAGTTCACATGTCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATACAGAAAGGGACCAGAGTCCCTCAGAGGAACACAGCCAACAGCAATGCTTAGGCTTCCATGCTATTGCTGTGCACCTGGATGCAAGAACAACATCGATCATCCTAGGGCTAAGCCCCTCAAAGACTTCAGAACCCTTCAAACACATTACAAGAGAAAGCATGGGATCAAGCCCTTCATGTGCAGAAAATGTTGCAAGGCTTTTGCTGTGAAAGGTGACTGGAGGACTCACGAGAAGAACTGTGGGAAGCTATGGTACTGCTCTTGTGGCTCTGACTTCAAGCATAAGAGATCTCTCAAAGATCATGTGAAGGCCTTTGGACATGGCCACACCCCTTGTGGAGTTGAGACTCTTGATCAAGACGATGAAGCTGGCTCCGAGGTTGAACAAGAAAATGAACCCTCCCACAAGTCCTGA 939 0.459 MTDPYFSNNFNGWFDLNYPNCLFSSSSSSSSPSSSSCSNPPLCHQYHLPLPSSPPLREALPLLNLSPRRPEEDPETSCTVMEVDKKDDETLTVALHLGLPPSMESTELLVSEKEEDEVTVASACAPSGMNRGQYWIPTPAQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSEYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGHGHTPCGVETLDQDDEAGSEVEQENEPSHKS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3918 312 SUPERFAMILY beta-beta-alpha zinc fingers 215 253 IPR036236 -
Bisa02g3918 312 Gene3D Classic Zinc Finger 148 171 - -
Bisa02g3918 312 PANTHER ZINC FINGER PROTEIN WIP2 25 307 IPR043584 GO:0003700|GO:0010468
Bisa02g3918 312 Gene3D Classic Zinc Finger 191 282 - -
Bisa02g3918 312 SUPERFAMILY beta-beta-alpha zinc fingers 145 172 IPR036236 -
Bisa02g3918 312 ProSitePatterns Zinc finger C2H2 type domain signature. 151 171 IPR013087 -
Bisa02g3918 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 176 IPR013087 -
Bisa02g3918 312 FunFam Zinc finger protein WIP2 202 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3918 Bisa-ChrBisa02 93333805 93336418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3918 1 304 C2H2 Transcription Factor Family AT1G51220 60.831 1.46e-132 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g3918 None None None