Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3912 ATGAGTTGGAACACACACATGGAGGTCCATTACAATAACATCAGCTATCCCTATAATACAGCAGGAAGCTTTATTGAATATTTTGAAGGTCTAACCTACGAACACGTCAATTTCATATTTTCTGGTGCTTCACATGGTCAGGAGAGCCTGTACCCATCAACTACAAGTTTTTACAAGTTTGGCCCATCTGAATCTGATAATACTCCATACTATCGATACAATCATGGTTATGAGGTGAACCATCATGGACCACAGATAGATGAGCATAGAAGGCCTTCAGAGAACTCGTCAACATTTAATGAACGGACTGCAGCAGTAAGTACTGAATGGGGTCAAGGTGTAAACACTGCCACACAAGATAATTTTGTTGAATGCCCACGAAGACATCATAGTTCCCATGATTATCAGGTCATTTGGCAAGACACTATTGATCCTGACAACATGTCCTATGAGGAATTACTTGAGTTAGGTGAGGTGGTTGGAACTCAAAGCCGTGGTCTGTCTCAAGAACAAATCTCTCTGCTTCCAGTTTCAAAGTATAAGTGTGGGTTTTTCTTGCGCAAAAAATCAAGGGATGAGAGATGTGTGATTTGCCAAATGGAATATAGAAGAGGGGACAAGCGGATCACCTTGCCTTGCAAACATATCTATCATGCTGGTTGTGCGAGAACATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACACGGAGGTTTTTGCTGATAGGTCAAAACACAAATGA 744 0.4126 MSWNTHMEVHYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHGQESLYPSTTSFYKFGPSESDNTPYYRYNHGYEVNHHGPQIDEHRRPSENSSTFNERTAAVSTEWGQGVNTATQDNFVECPRRHHSSHDYQVIWQDTIDPDNMSYEELLELGEVVGTQSRGLSQEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYRRGDKRITLPCKHIYHAGCARTWLSINKACPICYTEVFADRSKHK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3912 247 Pfam Ring finger domain 194 235 IPR001841 -
Bisa02g3912 247 ProSiteProfiles Zinc finger RING-type profile. 195 235 IPR001841 -
Bisa02g3912 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 240 IPR013083 -
Bisa02g3912 247 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 240 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bisa02g3912 247 SMART ring_2 195 235 IPR001841 -
Bisa02g3912 247 SUPERFAMILY RING/U-box 188 242 - -
Bisa02g3912 247 FunFam E3 ubiquitin ligase BIG BROTHER 157 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3912 Bisa-ChrBisa02 93269554 93272807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3912 8 246 C3H Transcription Factor Family AT3G63530 42.449 2.75e-63 196