Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g3907 | ATGAGGAAGCCCGAGTCTGGAAAAAACAACAACAACAACTCCAACAACAACAATAAGCTTAGGAAGGGGTTGTGGTCACCCGAGGAAGATGACAAGCTCATGAACTACATGATCAACAACGGACAAGGTTGTTGGAGTGATGTGGCCAGAAATGCAGGCTTGCAGAGATGTGGGAAGAGCTGTCGGCTTCGGTGGATCAATTACTTGAGGCCTGATCTCAAACGAGGTGCCTTCTCTCCCCAAGAAGAAGAACTCATCATCCACTTGCATTCCCTTCTTGGCAACAGGTGGTCTCAAATAGCGGCGCGATTACCAGGAAGGACCGACAATGAAATCAAGAACTTTTGGAATTCCACAATAAAGAAGAGGCTGAAGAACATGTCGTCCACTACAACCTCACAAAACGCAAGCGAGTCTTCGATATTATCTGAGCCTAACAAAGACGCCATGAACAACAACATGGGAGGTTTCATGCCTATGTTGAACAACAACATAATCGACAGGCTTCCTGGACTCAACATGATGCCACCTTCCGGAGGGTTCTTCAATGGAGGCCCATGCTTCACACAGAATATGGGATCAGCACTGGAAAACAATAACAACAGTGGGTTCTATATAGAAAACGGAGTTTTTGGGATTGAGAGTGTAAATATTGGAGCAGAAGGGGAATTGTTTGTGCCTCCTTTAGAGAGTGTTAGCACTATTACTACAGATAACAACAACAACGGCCTGAAAGAGGAGATTAACAGAGACACTAACATTAGTAGTTTCACTTACTTCGATAACATAAACAACAGAGCTGAGAATAGAAGTGGGGTGGTGGAGAATCTATATCAGGAGGATTTAACTTTGGGAGAGTGGGATTTGGAGGACTTGATGAAAGATGTTTCTTCCTTTCCCTTTCTTGATTTTTCAAGCTGA | 921 | 0.4397 | MRKPESGKNNNNNSNNNNKLRKGLWSPEEDDKLMNYMINNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSTTTSQNASESSILSEPNKDAMNNNMGGFMPMLNNNIIDRLPGLNMMPPSGGFFNGGPCFTQNMGSALENNNNSGFYIENGVFGIESVNIGAEGELFVPPLESVSTITTDNNNNGLKEEINRDTNISSFTYFDNINNRAENRSGVVENLYQEDLTLGEWDLEDLMKDVSSFPFLDFSS | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g3907 | 306 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 17 | 69 | IPR017930 | - | |
| Bisa02g3907 | 306 | SUPERFAMILY | Homeodomain-like | 20 | 116 | IPR009057 | - | |
| Bisa02g3907 | 306 | FunFam | MYB transcription factor | 19 | 75 | - | - | |
| Bisa02g3907 | 306 | Gene3D | - | 19 | 75 | - | - | |
| Bisa02g3907 | 306 | MobiDBLite | consensus disorder prediction | 7 | 22 | - | - | |
| Bisa02g3907 | 306 | FunFam | Transcription factor MYB46 | 76 | 148 | - | - | |
| Bisa02g3907 | 306 | CDD | SANT | 25 | 69 | IPR001005 | - | |
| Bisa02g3907 | 306 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Bisa02g3907 | 306 | MobiDBLite | consensus disorder prediction | 126 | 146 | - | - | |
| Bisa02g3907 | 306 | SMART | sant | 21 | 71 | IPR001005 | - | |
| Bisa02g3907 | 306 | SMART | sant | 74 | 122 | IPR001005 | - | |
| Bisa02g3907 | 306 | ProSiteProfiles | Myb-like domain profile. | 70 | 120 | IPR001005 | - | |
| Bisa02g3907 | 306 | CDD | SANT | 77 | 117 | IPR001005 | - | |
| Bisa02g3907 | 306 | ProSiteProfiles | Myb-like domain profile. | 17 | 69 | IPR001005 | - | |
| Bisa02g3907 | 306 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 70 | 124 | IPR017930 | - | |
| Bisa02g3907 | 306 | Gene3D | - | 76 | 147 | - | - | |
| Bisa02g3907 | 306 | PANTHER | MYB DOMAIN PROTEIN 55 | 15 | 156 | - | - | |
| Bisa02g3907 | 306 | Pfam | Myb-like DNA-binding domain | 22 | 69 | IPR001005 | - | |
| Bisa02g3907 | 306 | Pfam | Myb-like DNA-binding domain | 75 | 118 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g3907 | Bisa-ChrBisa02 | 93225365 | 93227961 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g3907 | 1 | 301 | MYB Transcription Factor Family | AT5G12870 | 49.191 | 1.45e-77 | 236 |
Transcription factors information