Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3901 ATGGGAGCTCGTTGCTCGAAGTTCTCACTGTGCTGGTGGTCCTCTAATATCAAATCAAATCTCCAAGACTTGTCTGATACCGACGATGGGAACAAGAATGAGAAGCTTGGATTCACAGAGTACAGCTTCGATCAACTAAGAACCGCCACTTCTGGATTTTCACCCGACAACATTGTATCGGAGCACGGCGAGAAAGCTCCCAATGTTGTCTACAGAGGGAAGCTTGAGGATGACACGTGGATTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAGTTCCTAGATGAAGCAAGAGCAGTGGGACAACTGAGAAGTGAGCGATTAGCTAACTTGATGGGATGTTGCTGTGAAGGAGAAGAGAAACTGCTTGTTGCTGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCATTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTGGCGTTTTACTTAGCACAAGCACTGGAGTACTGCAGCAGTAGAGGAAGGGGCTTGTACCATGATCTCAATGCTTATAGAATATTGTTTGATCAGGATGGCAATCCCAGACTCTCTTGTTTTGGACTTATGAAGAACAGCAGAGATGGTAGGAGCTATAGTACAAACTTAGCCTTCACCCCTCCAGAGTACTTGAGGACAGGAAGAATCACCCCAGAAAGTGTTATATATAGTTTTGGCACCCTTTTGCTTGATCTTCTCAGTGGCAAACATATCCCACCTAGTCATGCACTTGACCTTATACGAGGCAAAAACTTTTCGATGCTCACAGACTCATGTTTGGAAGGCCATTTTTCAAACGATGATGGAACTGAATTAGTGAGACTAGCTTCACGTTGTTTACAGTATGAACCTCGCGAGAGGCCAAATGCCAAGTCACTTGTGACTGCTCTAGCCCAACTTCAGAAAGAAACTTCGGTACCATCAAATGTTTTGATGGGCATACAAGAGGGGAGTGCATTGACGACAAAGGAATCGGTTTCGTTGACACCTTTCGGAGAAGCTTCTTGTAGAAGAGACTTCACTGCAATACATGAAATTCTGGAAAAGGTGGGGTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACAAATCAAATACAAGAAACCCTAAATTCTAAGAAGCAAGGAGATTCTGCTTTTCGCGCTAAAGACTTCTCCACGGCCATTGACTGCTATACACAGTTCATCGACGGAGGGACTATGGTTTCGCCAACGGTGTACGCGAGGCGTTGCTTATGTTACTTGATGAACGACATGGCTCAAGAAGCTCTTGGAGACGCCATGCAAGCCCAATCGGTATCACCCACTTGGCACACTGCCTTCTATCTGCAAGCAGCTGCCCTCTTCACCCTTGGAATGGACAACGATGCACAGGAAAGTCTTAAAGATGGCACAATGCTGGAAACCAGAAAACATAGAAATTGA 1470 0.4558 MGARCSKFSLCWWSSNIKSNLQDLSDTDDGNKNEKLGFTEYSFDQLRTATSGFSPDNIVSEHGEKAPNVVYRGKLEDDTWIAVKRFNKSAWPDSRQFLDEARAVGQLRSERLANLMGCCCEGEEKLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVAFYLAQALEYCSSRGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSMLTDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALAQLQKETSVPSNVLMGIQEGSALTTKESVSLTPFGEASCRRDFTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSVSPTWHTAFYLQAAALFTLGMDNDAQESLKDGTMLETRKHRN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3901 489 Gene3D Transferase(Phosphotransferase) domain 1 133 325 - -
Bisa02g3901 489 ProSiteProfiles Protein kinase domain profile. 56 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3901 489 SUPERFAMILY Protein kinase-like (PK-like) 36 312 IPR011009 -
Bisa02g3901 489 Gene3D Tetratricopeptide repeat domain 382 488 IPR011990 GO:0005515
Bisa02g3901 489 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Bisa02g3901 489 FunFam probable serine/threonine-protein kinase At4g35230 28 131 - -
Bisa02g3901 489 Pfam Protein tyrosine and serine/threonine kinase 69 307 IPR001245 GO:0004672|GO:0006468
Bisa02g3901 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 22 488 IPR045845 GO:0004672|GO:0009742
Bisa02g3901 489 SUPERFAMILY TPR-like 386 485 IPR011990 GO:0005515
Bisa02g3901 489 FunFam probable serine/threonine-protein kinase At4g35230 382 489 - -
Bisa02g3901 489 FunFam probable serine/threonine-protein kinase At5g41260 133 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3901 Bisa-ChrBisa02 93166832 93171309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3901 20 310 Glycoside Hydrolase AT3G07070 32.288 3.26e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bisa02g3901 PK_Tyr_Ser-Thr 6.6e-26 CL0016