Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3886 ATGGTGGCCGACAATGGAGTTGGAAAAGATATCACCGCTTCATTCCAGTATCAACGGGGGAATCTCTTTGGCCATCGCCGTTTTCTCCAATATTTGTATCTCTTTCACTCGCAGTTGAGAGTCATGGCGTTATCTAAAACGGCGGGTCTAGTTCCGGCGGCCCAAAACCCTTCTCAACCGGCAAAGTTACGATGGGGCGAGCTCGATGAGGACGACGGCGAGGATCTCGATTTTTTGCTACCGCCACGACAGGTCATAGGCCCCGACGAGAACGGCATAAAGAAGGTGATTGAGTACAAATTCAATGAAGATGGCAATAAGGTGAAAATCACTACCACCACTCGTAGTCGCAAGCTTGCTAACGCTCGCCTTAGTAAGCGGGCCGTTGAGAGGAGATCCTGGGGTAAGTTCGGCGATGCTGTTCACGAGGATGTCGGTAGCAGGCTCACCATGGTATCCACTGAAGAGATCCACCTCGAGCGACCTAGGGCTCCGGGTAGCAAACCAGAAGAACCAAAGACTGCTGGGGACCCGTTGGCTCAATTCCAAAAAGGTGCTGTTCTCATGGTCTGTAGGACTTGTGGAAAGAAGGGTGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAACCAGTGGAAGCATTTATTGATAAGCCTGCTGCATCAGAAGCTGCGGCTGCAGCTTCTGGTCCAACTAAGGGAGCGTATGTCCCGCCTGGCCTGAGAGCAGGGGCGGAGAGGACTGGAGGATCAGACATGCGGAGAAGGAATGATGAAAATTCTGTACGGGTCACCAACCTCTCAGAGGACACAAGAGAGCCTGACCTGCTTGAACTGTTCCGGCCTTTTGGTGCGGTAAGCAGAGTCTATGTGGCTGTTGATCAAAAGACTAGCATTAGCAGAGGATTTGGCTTTGTGAACTTTGTAAACAGGGAAGATGCCCAGCGAGCCATTAACAAACTTAATGGATATGGTTATGACAATCTCATCCTTAGAGTTGAGTGGGCCACCCCAAGGACAAACTAA 1032 0.5078 MVADNGVGKDITASFQYQRGNLFGHRRFLQYLYLFHSQLRVMALSKTAGLVPAAQNPSQPAKLRWGELDEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRSRKLANARLSKRAVERRSWGKFGDAVHEDVGSRLTMVSTEEIHLERPRAPGSKPEEPKTAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEAFIDKPAASEAAAAASGPTKGAYVPPGLRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTSISRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3886 343 Gene3D - 222 343 IPR012677 -
Bisa02g3886 343 Pfam Eukaryotic translation initiation factor 3 subunit G 84 210 IPR024675 -
Bisa02g3886 343 CDD RRM_eIF3G_like 263 338 IPR034240 -
Bisa02g3886 343 SMART rrm1_1 263 336 IPR000504 GO:0003723
Bisa02g3886 343 MobiDBLite consensus disorder prediction 228 260 - -
Bisa02g3886 343 MobiDBLite consensus disorder prediction 156 170 - -
Bisa02g3886 343 PIRSF Transl_init_eIF-3_RNA-bind 54 343 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bisa02g3886 343 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 262 340 IPR000504 GO:0003723
Bisa02g3886 343 MobiDBLite consensus disorder prediction 156 178 - -
Bisa02g3886 343 CDD eIF3G 91 209 IPR024675 -
Bisa02g3886 343 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 264 330 IPR000504 GO:0003723
Bisa02g3886 343 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 62 342 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bisa02g3886 343 FunFam Eukaryotic translation initiation factor 3 subunit G 226 343 - -
Bisa02g3886 343 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 69 339 - -
Bisa02g3886 343 SUPERFAMILY RNA-binding domain, RBD 260 342 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3886 Bisa-ChrBisa02 92993661 92996974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3886 61 341 Eukaryotic Initiation Factors Gene Family AT3G11400 69.551 4.73e-153 431