Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3880 ATGGAGTCTGACGATCAGCCAACATCAGAAGCAAAGGGGAGCGATGACCAAGGTGCAGGTGGGAGTCAAGTGACAAGGTCGTACGAGTGTATATTCTGCAAGAGAGGGTTCTCTAATGCACAAGCATTGGGAGGGCACATGAACATCCACAGGAAAGACAAAGCGAAGCTCAAGCAACCTTCTTCTCATCATCATCATCATCAACACAAGGTTGAACTTGAAGACAGAAGAACTAACCCTAACTGGCCTACTTGGAATATCATGGAAGATGCGTCCTCAAGGGATCATCACATAAGACAGCTACCACTGTTTGCAGAAACACCATGTGATGGTGAAACTCAAAAGCCACAAGAATTAGGTCAAGTTCATGATAGGGAAAAGGGTATGCCATCATCGGATCTAGACCTTGAACTAAGACTAGGGCCTCATCACCCACAGGACCCCTCTCCCACCATAAAATTCTTCTGA 468 0.4615 MESDDQPTSEAKGSDDQGAGGSQVTRSYECIFCKRGFSNAQALGGHMNIHRKDKAKLKQPSSHHHHHQHKVELEDRRTNPNWPTWNIMEDASSRDHHIRQLPLFAETPCDGETQKPQELGQVHDREKGMPSSDLDLELRLGPHHPQDPSPTIKFF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3880 155 MobiDBLite consensus disorder prediction 107 155 - -
Bisa02g3880 155 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Bisa02g3880 155 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g3880 155 Gene3D Classic Zinc Finger 16 81 - -
Bisa02g3880 155 MobiDBLite consensus disorder prediction 53 87 - -
Bisa02g3880 155 PANTHER OS07G0101800 PROTEIN 5 143 - -
Bisa02g3880 155 MobiDBLite consensus disorder prediction 117 142 - -
Bisa02g3880 155 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Bisa02g3880 155 SUPERFAMILY beta-beta-alpha zinc fingers 26 55 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3880 Bisa-ChrBisa02 92873028 92873495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3880 21 151 C2H2 Transcription Factor Family AT3G53820 36.000 3.75e-16 68.9