Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3871 ATGACCGACTACGACGGCGTTGCCGTGGACGAGGATGAACGGGTTCTCGAATGGGAGTTAGGTCTTCCCTCTGCCGATGATCTTACTCCTCTTTCTCAGCCCTTGATCCCGCCGGAGCTCGCCTCGGCCTTTAGCATCTCGCCGGAGCCCTGCCGCACGCTCCTCGACGTCAAACGTGCCTCGCAGATTACTCTATCGAGTCTTCGGGGCGGAGGTTCTCAGGCCTTTTCGTCGAACAATTTCAAGTCGTTCAACGATGACCGGAATCGGGACCCCGTCGTGGTCGCAAGCGATGATGAAGAGGCTGATCGGGATGTGTCGGGGTCTGATTCTAAGAAACTGAGGAAGATCGATTGCATAGAAGAAGCTGATTCGGCTTTCCGGACTGAGAATTCGACGGATGATCCGTCTGCTAGGACCTTGAAGCGGCCTCGCCTCGTATGGACTCCGCAGTTACACAAGAGGTTTGTGGATGTGGTGGGGCATCTGGGAATCAAGAATGCGGTGCCGAAGACGATTATGCAATTGATGAACGTCGAGGGATTGACCCGAGAAAATGTCGCAAGCCATCTTCAGAAGTATCGGCTTTACTTGAAGAGAATGCAGGGTCTGTCCAACGAGGGTCCTTCATCGTCGGACCAGCTCTTCGCATCCACTCCTGTGCCGCAGAGCTTACACGAGTCTGGTGGAAGTGGACATTCACATGGAAATGGGCATCTTCCGGTTCCGATTCCGATGCCTTATCCACCGCCTATGATATCCATGCCGTTACTCGGGATGCCCCATGGTCATGGTCATCCTCATGCTCACATGGGAATGCCGATGGCAAATCATGGGTTCGAGTCCCATCCATATAACATGTTGCAGCAAAGCGATTGGTCTGGCAATAAATATGCTTCGGTTGTATCATACCCTCACGTTACTACAAATGATAAATAA 939 0.5261 MTDYDGVAVDEDERVLEWELGLPSADDLTPLSQPLIPPELASAFSISPEPCRTLLDVKRASQITLSSLRGGGSQAFSSNNFKSFNDDRNRDPVVVASDDEEADRDVSGSDSKKLRKIDCIEEADSAFRTENSTDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGSGHSHGNGHLPVPIPMPYPPPMISMPLLGMPHGHGHPHAHMGMPMANHGFESHPYNMLQQSDWSGNKYASVVSYPHVTTNDK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3871 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 199 IPR017930 -
Bisa02g3871 312 Gene3D - 140 202 - -
Bisa02g3871 312 SUPERFAMILY Homeodomain-like 140 200 IPR009057 -
Bisa02g3871 312 FunFam Two-component response regulator 139 202 - -
Bisa02g3871 312 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 289 IPR044841 GO:0003700|GO:0006355
Bisa02g3871 312 MobiDBLite consensus disorder prediction 79 109 - -
Bisa02g3871 312 Pfam Myb-like DNA-binding domain 147 195 IPR001005 -
Bisa02g3871 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 144 196 IPR006447 GO:0003677
Bisa02g3871 312 MobiDBLite consensus disorder prediction 205 231 - -
Bisa02g3871 312 MobiDBLite consensus disorder prediction 205 240 - -
Bisa02g3871 312 MobiDBLite consensus disorder prediction 84 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3871 Bisa-ChrBisa02 92798206 92799144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3871 1 285 G2-like Transcription Factor Family AT3G46640 54.861 3.60e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa02g3871 Myb_DNA-binding 9.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3871 02 92798206 92799144 Bisa02g3871 02 92798206 92799144 ECH