Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3860 ATGGATACTCTTCTGGAAAATTTTCATGGTGGCGTAAATGGATTTAGGTTTGAGAATGGTCATATTTCGGGATTTTCAAACCAGAATACGGTCAACGAGTTTAACTTCGATGATAGACCCGTTGATTCATCTTCGCATCCAACCGGTTTGGAATCTCCCTGTGATTCCGGTCCTTCTTCTTTTGGCACGAATAAATATTTATTTGTATCTTCGGAGACTAATAAATATTCGAATCCAAGTCTCAGATACATAAGCGATATGCTCATGGACGAAGAAGACGACCTGGAGCGCAAGCCCTGTATGTTGCAGGATTGCTTGGCACTCCAAGCTGCTGAAAAATCATTCTACGATGTCCTTGGTCATAGCTACCCCTCTTCTCCCCGTCAAAACCCTAATTGCTTCCATGCAGAAGACATCAATAGCCCAGATGGTAATAACTTTGGTTGTACCCCTAGTTTTGAGAGCAATAGCAGCTGTGCTACAGATAATTCATCCGACTCTGATTGGATTAACGGTGTCGTTAATTCCCCAGAAAACTTCCTTGACGTTCCAGATCTATTTACAGAAACCCTAGCTCAGAGCAACCCGCTGGTGGATCTTGGGGTTACCATAGATAACTCAGTACCTAGAGGAAAAAGGGAAAAGAGAAGCCATTGGATGGATGATTCTATAAACGAAGATGAAGGGAGAGGCAGCAAACTTTCAGCGGTCTTTTCTGATGAATCAGAGACATCGGAGATTTTCGATGAGGTGCTTCTGTGTTACCAAGGAACTAGTCAATCCATGACATGTTCTGTTCCTGAACGACCACAAACTGGCGTAATCAATCTGAATGGTGACTCAGGAGGATCAAACGGGAAGCAAGCACGTTCAAAGAAAGGAGCTAACAGAGGGACGACGGTAGATTTATGGACCCTTCTAACCCAATGCGCACAGTCAGTGGCAAGCTATGACCAGAGAAATGCAAATGAGCTTCTGAAGCAGATAAGGCAGCACTCTTCTCCTTTTGGGGATGGACTTCAACGTTTAGCTCATTACTTTGCTAATGGCCTTGAGGCACGATTAGGATTAGCTGCTGGGACGCCATCATATACACCCCATAGCTGCAATGGGGCAACTGCCGCTGAGATGTTGAAAGCTTACAAGCTGTACATCACAGCAGCTCCTTTCCTGAGGATTTCAAATTTCTTGGCTAACAGAACAATTTTGAAGCTAGTAGAAGATAAACCCCGCCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCAGAAAGACAGGGTGGTCCTCCCAAGCTTCGTATAACAGGGATTGATCTTCCTCAATCGGGGTTTCGGCCGGCGGAGAGGGTTGAGGAGACGGGACGAAGGTTAGTAAACTACTGCAGGAGGTTCAATGTACCTTTTGAGTACAATTGCTTGGCGCAGAAATGGGAAACCATCCGACTTGAGGATCTGAAGGTCGACAGAACTGAGATAACCGTGGTTAACTGCTTGTACAGATTGAAGAACCTGCCTGACGAAACTGTGTCTCTGAACAGTCCTAGTCCTAGAGATGCTGTTTTGAATCTGATAAGGAGGATCAATCCAAAAATGTTCATACACGGGGTTGTCAATGGCACCTACAATGCACCATTTTTCGTGACTCGGTTCAGGGAGGCCTTGTTCCAGTACTCATCTCTGTTTGATATGTTTGAGGCTAATGTGGCCCGTGAAGACCCAGAGAGGTTGCTGTATGAGAGAGGGATATTTGGAAGAGATGCCATGAATGTGATAGCGTGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACCATAGAGCAAGATTCAAGCAACTCCGGGTCGACGCAGAACTCTTCAGTAAAGCCAGAGAAATGGTGAAGAAGGAATATCACAAGGATTTTGGAGTGGATGACAATGGCAAGTGGATTTTGCAGGGATGGAAAGGGCGTATCATCTATGCTCTCTCTTGTTGGAAACCTGCTTAA 2040 0.4534 MDTLLENFHGGVNGFRFENGHISGFSNQNTVNEFNFDDRPVDSSSHPTGLESPCDSGPSSFGTNKYLFVSSETNKYSNPSLRYISDMLMDEEDDLERKPCMLQDCLALQAAEKSFYDVLGHSYPSSPRQNPNCFHAEDINSPDGNNFGCTPSFESNSSCATDNSSDSDWINGVVNSPENFLDVPDLFTETLAQSNPLVDLGVTIDNSVPRGKREKRSHWMDDSINEDEGRGSKLSAVFSDESETSEIFDEVLLCYQGTSQSMTCSVPERPQTGVINLNGDSGGSNGKQARSKKGANRGTTVDLWTLLTQCAQSVASYDQRNANELLKQIRQHSSPFGDGLQRLAHYFANGLEARLGLAAGTPSYTPHSCNGATAAEMLKAYKLYITAAPFLRISNFLANRTILKLVEDKPRLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIDLPQSGFRPAERVEETGRRLVNYCRRFNVPFEYNCLAQKWETIRLEDLKVDRTEITVVNCLYRLKNLPDETVSLNSPSPRDAVLNLIRRINPKMFIHGVVNGTYNAPFFVTRFREALFQYSSLFDMFEANVAREDPERLLYERGIFGRDAMNVIACEGAERVERPETYKQWQVRNHRARFKQLRVDAELFSKAREMVKKEYHKDFGVDDNGKWILQGWKGRIIYALSCWKPA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3860 679 Pfam GRAS domain family 305 677 IPR005202 -
Bisa02g3860 679 MobiDBLite consensus disorder prediction 210 229 - -
Bisa02g3860 679 MobiDBLite consensus disorder prediction 210 230 - -
Bisa02g3860 679 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 671 IPR005202 -
Bisa02g3860 679 ProSiteProfiles GRAS family profile. 294 677 IPR005202 -
Bisa02g3860 679 MobiDBLite consensus disorder prediction 33 57 - -
Bisa02g3860 679 MobiDBLite consensus disorder prediction 275 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3860 Bisa-ChrBisa02 92645302 92647341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3860 69 678 GRAS Transcription Factor Family AT2G29060 46.709 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g3860 GRAS 7.9e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3860 02 92645302 92647341 Bisa12g0126 12 1643003 1645606 CCT
Bisa02g3860 02 92645302 92647341 Bisa02g3860 02 92645302 92647341 ECH