Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3859 ATGGACAGCGAAATTCCAAGCCGAGAGGACATTGAAGACATTAGGTTGGCTTATAAGAGGTTGACAGTTGACAAGAGGCGAGTGGACCAGACAGAAATGGGCATTGAAGCTACCAGAAAGGACGGCAACGTTATTGAATTGAAAAATCGTTCAAAGCTCAAACGACGCTGCACAGTTTACACGTTCTGGAATATGGATCCAAAGTTTGATTTTGTAAAAGGCTATAATAGAATTGACGATGGTACCGTCGTCTCCGATCCAAACAATTTCCCAAATCCAGAGAACGAGTTGGGGCTCCACCAGCACTATCAGAGCCTTCTTAATTTCACGAGCGATCCCTTGTATCAACCTTATGCGGACCCAGTTAATTTTGCTCCTCATACAGGCTTGAATTTCGAAGGAGAGCAGTTAGTTTCATCCTGGACGATGGACCCTGGAGGTGGTGTGTCAGATGTAGCGGCTGCATCCACGACTTCGCTAGGGGATCCTTCGCTGGATGACGCTGACTTCTCGGAAACCATCAAATACATAGGCCAAATTCTTATGGAAGAGAACTTTGAACAGAAACCAAGCATGTTTTATGATCCACTGAGACTGCAAACCACGGAGAAATCGTTCTATGATGCTCTTAAAGAGAATCAATCTCTTTCCCCCACTGGACACCCCCTCGACATTCATCAGAATCTTGATAGCCCGGATGGTAATTGTTCTGGTGCTAGTAGTATTGATTCTGGCAGTAACAGTAGTAGCAGCAACAATTCTTATGAGGCTAATAAGCCCTCTTCCTCGGATGCCCCAGTTTCTGGTGATTCTGCTTCCCAGTTAAATTCTCATTCCATCTCGGACAAGTCCTCTAAACCTTCAAGTTCTTCTACCACTAATATCAGTGATCGACTGTTAGATTTGGATCTCTCTATTACTAAGCTCTTGGCTCGAGATATTTTTAATGATAAGGAATCTGTCTCACAGTTTAAGAGGGGGTTAGAAGAAGCTAGCAAGTTTCTTCCAAGAGTACCTCAACTTGTCACTGGTCTGCAGAGCAACAAGGTGTCTTCAGAGTTGAAGAGAGAAGCAGGAAAGGCAGTTACCGATATTCGGGAGAATTCGCATGGGTTAAAGGGTAGGAAGAATCACGAGCGTGAAGATAGTGATACCGAAGAAGGGAGAAGCAACAAGCAGTCAGCAGTCTATGTGGAAGAGAGTGAGGTATCAGAAATGTTTGATCGAGTATTGCTGAGTGTTGAGAACGTTCCAATATATGACGAAAGCAAAGGGTTGCAGAATGGAATAGTCAAAGCTAAGGAGTCAAATGAACGGCCACATTCATCTGATGGGGGCAAGACTCGCTCTAAGAGACAAGGCAAGAAGAAGGAAACCGTGGATTTGAGGACTCTCCTCGTTCTATGTGCGCAAGCTGTGTCTGCTAATGACTCCAGAACTGCTAATGAACTGCTAAAGCAGATTAGGCAGCATTCTTCGCCACTTGGTGATGCATCACAGAGGTTGGCTCATTACTTTTCCAATGGCCTTGAGGCACGCTTGGTTGGTGCTAGTACTGGAACCCAAAGATTCTATACCTCTCTGAACTCCAAGTGGATTTCTGCTTCTGATATCTTGAAAGCTTACTCAGTTCTAATATCTGTCTGCCCTTTCAAGAAGCTTGCATATTTTTTTGCAAATAAGATGATTTTGAATGCAGCTGAAAAGGCGGAGTCCCTTCATATTATCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATTAAGTTTCTCTCAAAAAGAGATGGTGGGCCTCCGAAGCTACGCATCACAGGGATAGAATATCCCCAAGCTGGCTTTCGTCCAGCAGAGAGAATTGGAGAGACTGGACGACGTCTTGCTAATTATTGTAAACGTTTTGGTGTTCCATTTGAATACAAAGCCATAGCATCACAAAACTGGGAAACCATCCCATTGGAGGACTTTAAGATTGACAGCAATGAGCTGCTTGCTGTAAACTGTCTGATGAGATTTAAGAATTTACTGGACGAGACAATTGAAGTCAACAGTCCTAGAAATGCAGTATTGAATTTAATCAGGAAGATGAACCCAGATATTTTTGTTCAATCCATTCTCAATGGATCATACAATGCTCCTTTCTTTGCCACACGGTTCAAAGAGGCGCTGTTCCATTTCTCTGCAATGTATGATATGTTTGACACTCTCGTACCCCGTGATAATGAATGGAGGTTGATGAGTGAAAGAGAGTTTTTGGGTCGGGAGGCCATGAATGTGGTAGCCTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAGGGCCGGTTTCAAGCAGCTCCCGCTGAATGAGGAGCTAATGGCCAAATTTAGGGAAAAGTTGAAGGCATGGTATCACAAAGATTTTGTAATTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGTCGCATTTTGTATGCTTCTGCGAGTTGGGTGCCAGCGTAA 2520 0.4401 MDSEIPSREDIEDIRLAYKRLTVDKRRVDQTEMGIEATRKDGNVIELKNRSKLKRRCTVYTFWNMDPKFDFVKGYNRIDDGTVVSDPNNFPNPENELGLHQHYQSLLNFTSDPLYQPYADPVNFAPHTGLNFEGEQLVSSWTMDPGGGVSDVAAASTTSLGDPSLDDADFSETIKYIGQILMEENFEQKPSMFYDPLRLQTTEKSFYDALKENQSLSPTGHPLDIHQNLDSPDGNCSGASSIDSGSNSSSSNNSYEANKPSSSDAPVSGDSASQLNSHSISDKSSKPSSSSTTNISDRLLDLDLSITKLLARDIFNDKESVSQFKRGLEEASKFLPRVPQLVTGLQSNKVSSELKREAGKAVTDIRENSHGLKGRKNHEREDSDTEEGRSNKQSAVYVEESEVSEMFDRVLLSVENVPIYDESKGLQNGIVKAKESNERPHSSDGGKTRSKRQGKKKETVDLRTLLVLCAQAVSANDSRTANELLKQIRQHSSPLGDASQRLAHYFSNGLEARLVGASTGTQRFYTSLNSKWISASDILKAYSVLISVCPFKKLAYFFANKMILNAAEKAESLHIIDFGIQYGFQWPILIKFLSKRDGGPPKLRITGIEYPQAGFRPAERIGETGRRLANYCKRFGVPFEYKAIASQNWETIPLEDFKIDSNELLAVNCLMRFKNLLDETIEVNSPRNAVLNLIRKMNPDIFVQSILNGSYNAPFFATRFKEALFHFSAMYDMFDTLVPRDNEWRLMSEREFLGREAMNVVACEGIERVERPETYKQWQVRNTRAGFKQLPLNEELMAKFREKLKAWYHKDFVIDEDNNWMLQGWKGRILYASASWVPA 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3859 839 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 383 832 IPR005202 -
Bisa02g3859 839 MobiDBLite consensus disorder prediction 353 389 - -
Bisa02g3859 839 MobiDBLite consensus disorder prediction 434 457 - -
Bisa02g3859 839 ProSiteProfiles GRAS family profile. 453 837 IPR005202 -
Bisa02g3859 839 MobiDBLite consensus disorder prediction 214 294 - -
Bisa02g3859 839 Pfam GRAS domain family 462 836 IPR005202 -
Bisa02g3859 839 MobiDBLite consensus disorder prediction 430 457 - -
Bisa02g3859 839 MobiDBLite consensus disorder prediction 348 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3859 Bisa-ChrBisa02 92624468 92629678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3859 173 839 GRAS Transcription Factor Family AT1G07530 51.729 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g3859 GRAS 4.7e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0126 12 1643003 1645606 Bisa02g3859 02 92624468 92629678 CCT
Bisa02g3859 02 92624468 92629678 Bisa12g0127 12 1657912 1660164 CCT