Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3858 ATGGATCCGCATCTTAACTCCAGTTTCGTTAATGAATTTAACTTCGATCAAATGCCCATTATGCCCAATTTAGAACAGTACCCAAACCTTGTAAATGGGATTAAATCCAGCGACCCATCCAGAAACTTGGGAAACCCATTTTATCCACCTGATCCAAACTACGCTGGAAATCATGCTTCCGGATCTACCTTTGGTTCGGATGAGGATTCTCCCTTTGATGAGAATGACTTTTCTGGCACTGTCCTTCGCTACATAAACCAAATGCTCATGGAAGAGGACATGGAGGAGAAGCCCTGTATGTTTCATGATTCCTTAGCTCTCCACGCTGCTGAGAAATCATTCTACGAGGTTATAGGTGAGAAGTACCCTTCTTTCTCGATCCAACATCATCTTCAAAACTTTCATAATGTTGACAGCTCAGATGACAATCTCTCTGGTAGCTTAAGTGATTATGCCAGTATTGGCGGTTATGGTACTACCACTAGCAACTCTACTGATTCCCAGTGGAGTAATGTTGATGTTGCAGAGTACAAGCCTTCTATATTTCAAAGCACTTTTCCAGGTAATTTCGTGTTTCAGTCCAGTTCGACATCAAATAGGAGCAGCTTTACCAATAATAACAATGGTACTGTTGAGTCTTTCATCACTGAGTCTTTAGATTCTTCATTGTTTAGCAAGAGTGAGTCTGTATTGCAGTTTGAGAGAGGTGTGGAGGAAGCCAGCAAGTTCCTTCCTAAAAATAATCCATTGATTATTGATCTGGAGAGCAACAACTTTTCTTCCCCTCTTAGAAAGAATCAGCAGGTGGAAATTAAGACAGAGACAGGTGACAGGGAGCACTTGTCAACCAATTCAAAAGGGAGGAAGAATCGTGAGCGGGACGACGAGGTCTTTCCAGAAGATGGGAGAAGCAACAAGCAATCAGCAGGGTACGTGGACGATATTGAGTTGCCAGAACTATTTGATAAGATACTGCTTGGTATTGGGGATGGAAGAGATACTTGCAATGAAAACCACCAGTGTGGACCTGGACCAGGACCAGGACCAGGACCAGGGCCAGACATGAATCTGCAGCAAAATGAAGAATCAAATAAGTCTAGTAATGGGAAGACTCGTGCTAAGAAACAAAGCAAGGAAAGGGAAGTTGTGGATCTGAGGACACTACTAATCCTGTGTTCACAAGCTGTTTCATCCAATGATCGTGCCACTGCTAATGAGTTGTTAAAGCAAATCAGGCAGCATTCTAGCTCACTTGGTGATGGATCTCAGAGGTTGGCCGATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGCACTGGTACCCAAATTTACACTGCTTTATCCTCCAAAAGGACTTCAGCTGCTGATATGGTAAAAGCTTACCAAATGTTTATTTCAGCATGCCCATTCAAGAAGCTTGCAATCATATTTGCAAACCATACCATTCTGAGTCTAGCTAAAGTTGTGGACACACTTCATATTGTAGATTTTGGTATCCGTTATGGCTTCCAGTGGCCTGCACTCATTTATCGTCTCTCCAAACAACCCGGCGGACCCCCGAAGTTGCGTATCACTGGGATAGAGCTGCCACAACCTGGTTTCAGGCCAGCCGAGAGAGTCCAGGAGACAGGGTGTCGCCTGGCAAGGTATTGTGAGCGCTTCAATGTTCCCTTTGAGTATAATGCCATTGCACAGAAGTGGGAAACTGTGAATGTTGATGACCTGAAACTAAAGAAAAACGAACTTGTGGTTGTGAACTGTCTGGTTCGTTTTAAGAACCTACTAGATGAGACAGTTGTATTGAACAGTCCAAGGGATGGTGTTCTTAATCTAATCAGGAAGATAAATCCCAGCATATTTATACATGCAACAGTCAACGGGTGCTATAATGCACCCTTCTTCGTGACTCGGTTCCGGGAGGCTCTCTTTCACTACTCTTCACTGTTTGACATGCTTGACACCAACGTGGCTCGTGAAGATCCAATGAGGTTGATGTTTGAAAAAGAGTTCTTGGGGCGGGAGGTGCTGAACATTGTAGCTTGCGAGGGTCGTGAGAGGATTGAGAGGCCAGAGACATACAAGCAATGGCAGGTTCGGAACATGAGGGCTGGGTTCAAGCAGCTTCCCTTGGATAAACAACTCATCAACAAATTAAAGTGCAAGATGAGAGGTAATTATCACAGTGATTTCATGCTTAATGAAGATGGAAACTGGATGCTACAAGGCTGGAAGGGTCGAATCGTTTGTGCCTCCTCTTGTTGGGTGCCAGCATAG 2277 0.4427 MDPHLNSSFVNEFNFDQMPIMPNLEQYPNLVNGIKSSDPSRNLGNPFYPPDPNYAGNHASGSTFGSDEDSPFDENDFSGTVLRYINQMLMEEDMEEKPCMFHDSLALHAAEKSFYEVIGEKYPSFSIQHHLQNFHNVDSSDDNLSGSLSDYASIGGYGTTTSNSTDSQWSNVDVAEYKPSIFQSTFPGNFVFQSSSTSNRSSFTNNNNGTVESFITESLDSSLFSKSESVLQFERGVEEASKFLPKNNPLIIDLESNNFSSPLRKNQQVEIKTETGDREHLSTNSKGRKNRERDDEVFPEDGRSNKQSAGYVDDIELPELFDKILLGIGDGRDTCNENHQCGPGPGPGPGPGPDMNLQQNEESNKSSNGKTRAKKQSKEREVVDLRTLLILCSQAVSSNDRATANELLKQIRQHSSSLGDGSQRLADCFANALEARLAGTGTQIYTALSSKRTSAADMVKAYQMFISACPFKKLAIIFANHTILSLAKVVDTLHIVDFGIRYGFQWPALIYRLSKQPGGPPKLRITGIELPQPGFRPAERVQETGCRLARYCERFNVPFEYNAIAQKWETVNVDDLKLKKNELVVVNCLVRFKNLLDETVVLNSPRDGVLNLIRKINPSIFIHATVNGCYNAPFFVTRFREALFHYSSLFDMLDTNVAREDPMRLMFEKEFLGREVLNIVACEGRERIERPETYKQWQVRNMRAGFKQLPLDKQLINKLKCKMRGNYHSDFMLNEDGNWMLQGWKGRIVCASSCWVPA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3858 758 MobiDBLite consensus disorder prediction 270 302 - -
Bisa02g3858 758 MobiDBLite consensus disorder prediction 35 72 - -
Bisa02g3858 758 MobiDBLite consensus disorder prediction 263 311 - -
Bisa02g3858 758 Pfam GRAS domain family 385 755 IPR005202 -
Bisa02g3858 758 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 336 745 IPR005202 -
Bisa02g3858 758 MobiDBLite consensus disorder prediction 335 379 - -
Bisa02g3858 758 ProSiteProfiles GRAS family profile. 376 756 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3858 Bisa-ChrBisa02 92618229 92620505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3858 81 758 GRAS Transcription Factor Family AT1G07530 57.887 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g3858 GRAS 3.1e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0127 12 1657912 1660164 Bisa02g3858 02 92618229 92620505 CCT
Bisa02g3858 02 92618229 92620505 Bisa02g3858 02 92618229 92620505 ECH
Bisa05g1492 05 26848595 26850472 Bisa02g3858 02 92618229 92620505 ECH