Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3853 ATGAGAAGGTTCCCAGAGGACTCGCGTTCAATGATCAAAATGCCACAAAAGACAAACCCATATTCATTCATATCATCATCTTTAAGCTTCTCCCTCCTTCCCACACAGGCTTCCATGGCCATGGCTCTTCCCCTTCTGCTCTGCATTGCCTCTTTCGCCTCTTTCCTCTGCAGAACTGAAGCTAGAATCCCAGGGGTTTACAATGGAGGCTCTTGGCAATCTGCTCATGCCACTTTCTATGGAGGAGCCGATGCTTCTGGCACTATGGGTGGAGCTTGTGGATATGGCAACCTGTACAGCCAAGGGTACGGAGTGAACACAGCAGCACTGAGCACAGCTCTGTTCAACAGTGGCCTCTCCTGCGGCGCCTGCTTCGAGATCAAGTGTGCAAACGACCGTCAATGGTGCCACTCCGGCAGCCCCTCCATCCTCATCACCGCCACCAACTTCTGCCCTCCAAACTACGCTCTTCCCAACGACAATGGCGGCTGGTGCAACCCCCCTCGCCCACACTTCGACCTCGCCATGCCCGTGTTCCTCAAGATCGCCGAGTACCGCTCCGGCATCGTCCCTGTCGCCTTCCGCCGGGTGCCATGCAGGAAGGGGGGAGGGATAAGGTTCACGATCAACGGCTTCCGGTACTTCAACCTGGTCCTGATCAGCAACGTCGCCGGCGCAGGGGATATCGTGAGGGCGTACGTGAAGGGGTCGCGGACGGCGTGGATACCGATGAGCAGAAACTGGGGTCAGAATTGGCAGTCGAACGCAGTGTTGGTGGGTCAAGCGTTGTCGTTTAGGGTCACAGGCAGTGACAGACGCACCTCAACCTCATGGAACATAGCTCCTCCCCATTGGCAGTTCGGTCAAACTTTCACCGGCAAGAATTTTCGGGTCTGA 897 0.5608 MRRFPEDSRSMIKMPQKTNPYSFISSSLSFSLLPTQASMAMALPLLLCIASFASFLCRTEARIPGVYNGGSWQSAHATFYGGADASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPVFLKIAEYRSGIVPVAFRRVPCRKGGGIRFTINGFRYFNLVLISNVAGAGDIVRAYVKGSRTAWIPMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIAPPHWQFGQTFTGKNFRV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3853 298 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 90 204 IPR007112 -
Bisa02g3853 298 SMART dpbb_1 107 194 IPR007112 -
Bisa02g3853 298 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 214 293 IPR007117 -
Bisa02g3853 298 FunFam Expansin 61 200 - -
Bisa02g3853 298 SUPERFAMILY Barwin-like endoglucanases 71 222 IPR036908 -
Bisa02g3853 298 CDD DPBB_EXPA_N 72 199 - -
Bisa02g3853 298 Gene3D - 204 296 IPR036749 -
Bisa02g3853 298 Gene3D - 60 200 IPR036908 -
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 187 203 IPR007118 GO:0005576
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 279 293 IPR007118 GO:0005576
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 89 107 IPR007118 GO:0005576
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 71 86 IPR007118 GO:0005576
Bisa02g3853 298 PRINTS Expansin/Lol pI family signature 111 129 IPR007118 GO:0005576
Bisa02g3853 298 Pfam Expansin C-terminal domain 205 282 IPR007117 -
Bisa02g3853 298 FunFam Expansin 204 296 - -
Bisa02g3853 298 SUPERFAMILY PHL pollen allergen 202 293 IPR036749 -
Bisa02g3853 298 Pfam Lytic transglycolase 107 193 IPR009009 -
Bisa02g3853 298 PANTHER EXPANSIN-A15 51 296 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 250 271 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 129 140 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 162 179 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 215 236 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 143 153 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 203 215 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 279 295 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 102 116 IPR002963 GO:0009664
Bisa02g3853 298 PRINTS Expansin signature 179 192 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3853 Bisa-ChrBisa02 92546127 92550122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3853 41 298 Expansin Gene Family AT2G39700 82.171 3.57e-161 447