Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3850 ATGAGCTTGGCCTCACCCCTCAACCTGACTGCGAACAGGTTCCTTTCTGGAATTCTTGGCGTTTTTCCTTTTTCAATCAAGTTTCGACATGTGTTTTGGGAAGTCGTTCGAGGGATTTGTGATTTTGTTTCTGGTAGCATGGGAATTTGCTTGAGCGCCCGAATTAAAGCTGAGAGCCAATGTTTTACAGGTTTGAATTCAAAACCTGTGAGCACAGAGGGAAATGATCTGAGCAGTATAGATAGTAAGGTCTCTGCGCCTCGTACTCTTCGGAGTGAGGGTGAGATCTTGCAGTCATCCAATATAAAGAGCTTTAGTTTCGCAGAACTTAGGGCTGCCACAAAAAATTTCCGTCCAGATAGTGTTTTAGGAGAAGGTGGTTTCGGTTCAGTGTATAAGGGGTGGATTGATGAGCATTTCTTGCCTGCTTCCAAACCCGACGCCAGCATTGTTATTGCTGTGAAAAAACTCAAACAAGATAGTAGCCAAGGTCACAATGAGTGGTTGGCTGAAGTGAACTATCTTGGACAATTTTCTAATCCCCATCTTGTAAACTTGATTGGCTATTGCCTTGAAGATGAACACCGACTTCTGGTCTATGAATTTATGCCCCGAGGCAGCTTGGAGAATCATTTGTTCCGGAGAGGATCGTATTTTCAACCCCTTTCTTGGAGACTCCGTTTGAAGGTAGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTCCACAGTACTGAAACAAAAGTGATATTTAGGGACTTCAAGACTTCAAATATCTTGCTTGATTCTAATTACAATCCAAAACTTTCTGATTTTGGGATGGCCAAGGATGGACCTGCAGGGGACAAAAGTCATGTCACTACCAGGGTAATGGGAACTTATGGATATGCAGCTCCAGAATATATAGCCACTGGTCATCTTACTCCAAAGAGCGATGTGTATAGTTTTGGAGTAGTCCTGCTTGAAATATTATCAGGCCGGCGAGCAGTTGACAAGAACCGACCATCGGGACAGCAAAATTTTGTGGAGTGGGCTAAGCCATACCTGGCCAAGAAACGCAAGTTCTTCCGAGTTCTGGATAACCGTCTCGAAGGTCAGTATACTACAGATGAGGCCTACAAGGTTGCTGTGCTTGCACTACGATGCATTTCCACAGAATCCAAGTTCAGGCCAAGCATGGAAGAAGTTGTGACAGCATTGGAGCAGCTTCAGGTTCCTATTGTAAATGGAGGCAATCAAAAATCTGCTAACAGATGCCGTGACCGGAGAAAAAGCGCAGATGATGCTAAACATGGGACTACTACCACAGCTTATCCTCGTCCCTCTGCTTCTCCTCTCTATGCTTGA 1344 0.4479 MSLASPLNLTANRFLSGILGVFPFSIKFRHVFWEVVRGICDFVSGSMGICLSARIKAESQCFTGLNSKPVSTEGNDLSSIDSKVSAPRTLRSEGEILQSSNIKSFSFAELRAATKNFRPDSVLGEGGFGSVYKGWIDEHFLPASKPDASIVIAVKKLKQDSSQGHNEWLAEVNYLGQFSNPHLVNLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWRLRLKVALGAAKGLAFLHSTETKVIFRDFKTSNILLDSNYNPKLSDFGMAKDGPAGDKSHVTTRVMGTYGYAAPEYIATGHLTPKSDVYSFGVVLLEILSGRRAVDKNRPSGQQNFVEWAKPYLAKKRKFFRVLDNRLEGQYTTDEAYKVAVLALRCISTESKFRPSMEEVVTALEQLQVPIVNGGNQKSANRCRDRRKSADDAKHGTTTTAYPRPSASPLYA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3850 447 Gene3D Transferase(Phosphotransferase) domain 1 203 421 - -
Bisa02g3850 447 PANTHER OS01G0588500 PROTEIN-RELATED 83 403 - -
Bisa02g3850 447 CDD STKc_IRAK 123 402 - -
Bisa02g3850 447 MobiDBLite consensus disorder prediction 415 429 - -
Bisa02g3850 447 ProSitePatterns Protein kinases ATP-binding region signature. 123 156 IPR017441 GO:0005524
Bisa02g3850 447 SUPERFAMILY Protein kinase-like (PK-like) 89 399 IPR011009 -
Bisa02g3850 447 Pfam Protein tyrosine and serine/threonine kinase 121 399 IPR001245 GO:0004672|GO:0006468
Bisa02g3850 447 Gene3D Phosphorylase Kinase; domain 1 92 202 - -
Bisa02g3850 447 MobiDBLite consensus disorder prediction 410 447 - -
Bisa02g3850 447 FunFam Probable serine/threonine-protein kinase PBL8 203 419 - -
Bisa02g3850 447 ProSiteProfiles Protein kinase domain profile. 117 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3850 447 FunFam Serine/threonine-protein kinase BIK1 84 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3850 Bisa-ChrBisa02 92525683 92527973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3850 95 399 Glycoside Hydrolase AT3G07070 49.346 2.18e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa02g3850 PK_Tyr_Ser-Thr 7.7e-46 CL0016