Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3849 ATGGGAATTTGCTTGAGCGCCGAAATTAAAGCTGACAGCCAATGTAAAACAGGTTTGAATTCAAAACCTGTGAACGCAGAGGGAAATGATCTGAGTAGTATAGATAGTAAGGCCTCTATGGCCACAGTGCCTCGTACTCCTCGTAGTGAGGGTGAGATCTTGCAGTCATCCAATATGAAGAGGTTTAGTTTCGCAGAACTTAAGGCTGCTACGAGAAATTTCCGTCCAGATAGTGTTTTAGGAGAAGGTGGTTTCGGTTCAGTCTTTAAGGGGTGGATTGATGAGCATTCCTTGGCTGCTGCCAAACCCGACGCCGGCATTGTTATTGCTGTGAAAAGACTTAAACAAGATAGTAGCCAAGGTCACAACGAGTGGTTGGCTGAAGTGAACTATCTTGGACAATTTTCTCATCCCCATCTTGTAAAATTGATTGGGTATTGCCTTGAAGACGACCACCGTCTTCTGGTTTACGAATTTATGCCCCAAGGCAGCTTGGATAATCATTTGTTCGGGAGAGGCTTTCAACCTCTTTCTTGGACCCTCCGTTTGAAGGTCGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTCCACAGAACCGAAACAAAAGTGATATTTAGGGACTTCAAGACTTCAAATATCTTACTCGATTCTAATTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAAGGATGGACCTGCAGGGGACAAAAGTCATGTCACTACCAGGGTACTGGGAACTTATGAATATGCAGCTCCAGAATATATAGCCACTGGTCACCTAACTCCAAAGAGCGACGTGTATAGTTTTGGAGTAGTCCTGCTTGAAATGTTATCAGGCCAAGGAGCAGTTGACAAGAGCCGACCATCGGCACAGCACAATTTGGTGGAGTGGGCCAAGCCATACCTGGCCAAGAGACGCAAGCTCTTCCGAGTTCTGGATAACCGTCTCGAAGGTCAGTATCCTGCAGATGAGGCCTACAAGGTTGCTACGCTTGCACTGCGATGCATTTCCACAGAATACAAGTTCAGGCCAAGCATGGAAGAAGTTGTTACAGCATTGGAGCAGCTTCAGGTTCCTATTGTAAATGGAGGCAATAAAAAATCTGCTAACAGATGCCGTTATCGGAGAAGAAGCGAAGATGATGCTAACCATGGGATGACCACCACCACAGCTTTTCCTCATCCCTCTGCTTCTTCTCTATATGCTTGA 1212 0.4579 MGICLSAEIKADSQCKTGLNSKPVNAEGNDLSSIDSKASMATVPRTPRSEGEILQSSNMKRFSFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEHSLAAAKPDAGIVIAVKRLKQDSSQGHNEWLAEVNYLGQFSHPHLVKLIGYCLEDDHRLLVYEFMPQGSLDNHLFGRGFQPLSWTLRLKVALGAAKGLAFLHRTETKVIFRDFKTSNILLDSNYNPKLSDFGLAKDGPAGDKSHVTTRVLGTYEYAAPEYIATGHLTPKSDVYSFGVVLLEMLSGQGAVDKSRPSAQHNLVEWAKPYLAKRRKLFRVLDNRLEGQYPADEAYKVATLALRCISTEYKFRPSMEEVVTALEQLQVPIVNGGNKKSANRCRYRRRSEDDANHGMTTTTAFPHPSASSLYA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3849 403 MobiDBLite consensus disorder prediction 366 403 - -
Bisa02g3849 403 Gene3D Transferase(Phosphotransferase) domain 1 160 373 - -
Bisa02g3849 403 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Bisa02g3849 403 SUPERFAMILY Protein kinase-like (PK-like) 51 359 IPR011009 -
Bisa02g3849 403 CDD STKc_IRAK 80 357 - -
Bisa02g3849 403 Pfam Protein tyrosine and serine/threonine kinase 78 354 IPR001245 GO:0004672|GO:0006468
Bisa02g3849 403 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Bisa02g3849 403 PANTHER OS01G0588500 PROTEIN-RELATED 40 358 - -
Bisa02g3849 403 MobiDBLite consensus disorder prediction 385 403 - -
Bisa02g3849 403 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 160 364 - -
Bisa02g3849 403 ProSiteProfiles Protein kinase domain profile. 74 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3849 403 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3849 Bisa-ChrBisa02 92484307 92486331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3849 52 354 Glycoside Hydrolase AT3G07070 47.712 5.28e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa02g3849 PK_Tyr_Ser-Thr 2.3e-47 CL0016