LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g3845	ATGGGAAAGCACTTGATTTCTTCCCAGGAATCCACTGTGCAATTCCAGGACAATAAACAAGGATGCATGTGGGGTATACTTCATATACTTCATTACCATCATTGGCATAACGTCAAAAAGGTCTTACCTCACAAAAAGCATCACTGGGGGAGACATGCCAGATATAAGAGAAAATCCAATTTGTACAATCATAGTATTGGCGAAGACCAGCAATTTGGGGATGTAGATGCCAAACCTCTTTTGATTAGGCAACAAAGCAAAAAAGGGATTGCTACTGGCAAAAACTCTACTCGAAGTCGAAAAAAAGGATTGCATGTTGAAAATAGATCCGAAGAAGAAAGTTCAAAAGGCTGGATCTTAAGCTTCCATACTAGGCCACAACATTTGGAGTCTTCAGATAAATCTGCCATGGAAACTAATAAACTTGACAGAGAATTTTCCAGAAAGTTTAAAGAGCATACTGATGTTTTGGAGGCATTTAAAGCAGAGAAAGATTTAGTCCTGAAATTTCTAAGAGATCTAGATAGTGGTGGGAAAAACTTGCAGAGCAAGAAAGCAAGAATGACGAAATCAGGGTCATTTCCTACAGCAAAATCTTCACAGATCAGAAACATTAACTCAAGAAGTACCCCCAAACACAAGAAAAATGAAATTTGGGCCTTCCCAAAAGGGGAAAAGTTGCTTGCTGGTACTCAAGCACCAAGTACATTTGCAAAAGATATTTCTCATATGAAGGCAGGGCCACTAGTGAGTGATCATGGCGCCGTCAGTGCTATGAAACAAGATTCAGTCTTCTCTTTGTCAAAGCCTTCACAAGGATTACACCACAGAGGGTGGAATCAATTGGTTCTTCATCGTTTCAAAGTTATAAAGCAGAAGATAAAGCATGCTCTTATGGAATTCACAAAAAATGGTTATCAAACTTCAGCAGTTCGCCACAGAGCTTCATCTGAAAATAGGCTCGGGAAAGAGGTGTCAGAAAGTTTATTTCAGGATGCCATGAATGAGAATAGAAACTCAAATGAGACCAAGGCTTCTGATTATGATTCCAACAATTGCCTCATTCGAAGAACATCTTCTCTAAATGAATCACTGGATAGATATACTCAGTTGTTTGAGCGAAGTTTTGGCAAAGACATCAAATGGCATAGCTCCATGTCCAAGAGCTTAAAAGTGACAAATGAGGATAAGAATCACGCGAGTGGATATGCTCCAAAGTTGACCAAAAGGAATTTGTCCCTCCCTAATATTGAGGCTATTAGCTTCATTCTACATGAGGCTATTTGGGAGGCAAATGATGCTGGGAGTATTCCTGAAAGAACTTCTTTGGATAATAATAAAAAAGCCGAAACTAATAACCCTGTTCGTCGAGGGTCAGTGAGCCGTCCTGTAAACAAAGACACACCACTGAATGATGTTACAGAGACAGAGATTGAGGCTCAGAAAGAGGTAGAAAAGGATAAGACTAAGAAGAGTGTGACACCCAATCCTTTATCTGATTTAACTGTGGAGAAAAATGACATACATGAACTTGCAATGGAACCTGGAAGTTCTTACCAAGAAAATGTGGAAATAGAAATGACTATCAATCATGGCAAAGATGTAATGGAATTTCTTGAAACTAGCTGTGAAGACAATGCAACCAACAATGCAGAAGATAAAGAGGAAAATACTAGAGGCTCTAGCATGGATGATGAAATGGACAAAGATTTACCAAAAACAGAAAGCAGATATTCTTTGCCAGAAAAAGAGACAGACAAGAGTCGTGATAATTATTTCCTGCTCTTTGGATCAGATATAGAAAACGATTCCAATTTCAAATATGTGAAGCACATTATTGAACTTTCAGGCTTCATGGAAGATGACCATATTCAAACGTGGCACACAGTGAACCAGCCACTAAAGCCTTCCTTATTTAAAGAGATTGAATGCTGTGAAGAAGATATTTGCAAACCCAATGATCATCAGCTTCTTTTCAATGTAGTTAACGAGGTATTGCTTGATATATATGAGGGGTCATCAACCTTCTTCCCTAGGCCCTTCTCCTTCAACCTCCGCCTTCATCCGATGCCTAAGGGACACCATCTTCTTAAGGAAGTGTGGGCTGGAGTGAACTTGTACTTGAGCTTGAAGCCAGAGTTAGATCAGACATTAGACGATGTTGTGGGACGAGATTTGGCAAGTACTGGCTGGATGAAACTTCAGTGGGAAGAGGAGTGTGTAGCACTTGAACTGGAGGACATGATTGTGGATGAACTGTTAGATGAAATCATCTTCTCTTGA	2283	0.3964	MGKHLISSQESTVQFQDNKQGCMWGILHILHYHHWHNVKKVLPHKKHHWGRHARYKRKSNLYNHSIGEDQQFGDVDAKPLLIRQQSKKGIATGKNSTRSRKKGLHVENRSEEESSKGWILSFHTRPQHLESSDKSAMETNKLDREFSRKFKEHTDVLEAFKAEKDLVLKFLRDLDSGGKNLQSKKARMTKSGSFPTAKSSQIRNINSRSTPKHKKNEIWAFPKGEKLLAGTQAPSTFAKDISHMKAGPLVSDHGAVSAMKQDSVFSLSKPSQGLHHRGWNQLVLHRFKVIKQKIKHALMEFTKNGYQTSAVRHRASSENRLGKEVSESLFQDAMNENRNSNETKASDYDSNNCLIRRTSSLNESLDRYTQLFERSFGKDIKWHSSMSKSLKVTNEDKNHASGYAPKLTKRNLSLPNIEAISFILHEAIWEANDAGSIPERTSLDNNKKAETNNPVRRGSVSRPVNKDTPLNDVTETEIEAQKEVEKDKTKKSVTPNPLSDLTVEKNDIHELAMEPGSSYQENVEIEMTINHGKDVMEFLETSCEDNATNNAEDKEENTRGSSMDDEMDKDLPKTESRYSLPEKETDKSRDNYFLLFGSDIENDSNFKYVKHIIELSGFMEDDHIQTWHTVNQPLKPSLFKEIECCEEDICKPNDHQLLFNVVNEVLLDIYEGSSTFFPRPFSFNLRLHPMPKGHHLLKEVWAGVNLYLSLKPELDQTLDDVVGRDLASTGWMKLQWEEECVALELEDMIVDELLDEIIFS	760

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	182	201	-	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	85	110	-	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	438	471	-	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	545	584	-	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	472	493	-	-
	Bisa02g3845	760	Pfam	Domain of unknown function (DUF4378)	606	756	IPR025486	-
	Bisa02g3845	760	PANTHER	PROTEIN TRM32	1	760	IPR044257	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	547	584	-	-
	Bisa02g3845	760	MobiDBLite	consensus disorder prediction	437	502	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g3845	Bisa-ChrBisa02	92454222	92457086	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g3845	148	749	TRM (TON1 Recruiting Motif) Superfamily	AT5G02390	28.160	1.58e-48	182