Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3819 ATGTCTGCGGCTTTGGATATGACCCTTGATGATATCATAAAAAACAACAAGAAGTCTGGATCCGCTAACTCCAGAGGTCGTGGTCGAGGATCCGGTCCCGGTCCGGCTCGCCGCGTCTCTAACCGCGCTGCCAATCGTGCCGCACCTTATACTACTGCGAAGGCACCGGAGGCGACATGGCAGCATGATATGTACGCGGATCAGCCCGCGGCACAGTACGCAACTCAAGGTGGTCGAGCGTCATCCATAGAAACGGGAACCAAGCTCTACATATCTAATTTGGATTACGGTGTCTCGAACGAGGATATTAAGGAATTGTTTTCTGAAGTTGGTGACCTGAAACGGCATACAGTTCACTATGATAGGAGTGGCAGATCAAAGGGTACAGCAGAAGTAGTCTTTTCACGACGAACTGATGCTGTAGCTGCAGTAAAGAGATACAACAATGTTCAACTTGATGGGAAACCGATGAAGATAGAGATTGTGGGGACGAATATTGCCACACCTGCTGTGGTGCCTGCTGCAAATGGAGCTGTTGGGAATGCAAATGGAGTTCCTAGAATTGGACAAGGGAGAGGTGGGGCATTTGGAAGGCCCCGTGGAGGAGGTAGAGGGCGTGGCATCCGGAGGGGTCGAGGACGTGGAAGGGGTCGTGGAGAAAAGGTATCTGCTGAAGATCTTGATGCTGATTTGGAGAAGTATCATTCAGAGGCAATGGAATTAAATTGA 729 0.5021 MSAALDMTLDDIIKNNKKSGSANSRGRGRGSGPGPARRVSNRAANRAAPYTTAKAPEATWQHDMYADQPAAQYATQGGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRHTVHYDRSGRSKGTAEVVFSRRTDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAVVPAANGAVGNANGVPRIGQGRGGAFGRPRGGGRGRGIRRGRGRGRGRGEKVSAEDLDADLEKYHSEAMELN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3819 242 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 240 - -
Bisa02g3819 242 SMART rrm1_1 88 160 IPR000504 GO:0003723
Bisa02g3819 242 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Bisa02g3819 242 CDD RRM_THOC4 87 161 - -
Bisa02g3819 242 SUPERFAMILY RNA-binding domain, RBD 26 161 IPR035979 GO:0003676
Bisa02g3819 242 Pfam C-terminal duplication domain of Friend of PRMT1 187 237 IPR025715 -
Bisa02g3819 242 Gene3D - 60 224 IPR012677 -
Bisa02g3819 242 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Bisa02g3819 242 MobiDBLite consensus disorder prediction 185 242 - -
Bisa02g3819 242 MobiDBLite consensus disorder prediction 1 55 - -
Bisa02g3819 242 SMART FoP_duplication_2 175 242 IPR025715 -
Bisa02g3819 242 MobiDBLite consensus disorder prediction 217 242 - -
Bisa02g3819 242 FunFam THO complex subunit 4 80 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3819 Bisa-ChrBisa02 92089681 92092975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3819 86 161 Eukaryotic Initiation Factors Gene Family AT2G23350 36.842 1.04e-09 56.2