Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3812 ATGGCCAAATATTCATGTAAAGTTGGCGAAACTAAGGCACAGAGAGGGTTTAGAGTGAAAGGTGGGTTTAAGTGCAAGAGTTGCAATAGGGAGTTTTCGTCGTTTCAAGCGCTTGGAGGGCACAGAGCGAGCCACATGAAGCCGACGGTGAGGTCGACGAAGACCAGCGGCAACGAGAAGAGGCATGAGTGCCATATCTGTGGGCTTCAGTTTGGGACTGGACAAGCCTTGGGAGGCCACATGAGGAAACACAGAGATGCTGCTGCTGCTGCTGCTGCTGCTCCCATTAACGACGTCGCTTTGATGCCCAAATCCGATAATTCTACTCGAGGGATTGATTTGGTGTCGTTGGACTTGAACTTGACGCCGTTTCAGAATGTTTTGAAGCTTCACTTGAGGCCGCCCTTGCTTTATTGTTTTATTTAG 426 0.4953 MAKYSCKVGETKAQRGFRVKGGFKCKSCNREFSSFQALGGHRASHMKPTVRSTKTSGNEKRHECHICGLQFGTGQALGGHMRKHRDAAAAAAAAPINDVALMPKSDNSTRGIDLVSLDLNLTPFQNVLKLHLRPPLLYCFI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3812 141 SUPERFAMILY beta-beta-alpha zinc fingers 23 84 IPR036236 -
Bisa02g3812 141 Gene3D Classic Zinc Finger 20 84 - -
Bisa02g3812 141 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Bisa02g3812 141 Pfam C2H2-type zinc finger 61 86 - -
Bisa02g3812 141 Pfam C2H2-type zinc finger 23 48 - -
Bisa02g3812 141 SMART c2h2final6 23 45 IPR013087 -
Bisa02g3812 141 SMART c2h2final6 62 84 IPR013087 -
Bisa02g3812 141 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Bisa02g3812 141 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Bisa02g3812 141 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 45 IPR013087 -
Bisa02g3812 141 PANTHER ZINC FINGER PROTEIN ZAT5 13 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3812 Bisa-ChrBisa02 91942647 91943072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3812 23 129 C2H2 Transcription Factor Family AT2G37430 46.087 3.31e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g3812 zf-C2H2_6 2.1e-11 CL0361