Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3808 ATGGTTCAACAAGAAATCAGGAAGGGTCCATGGACAGAACAGGAGGACATCAAATTGGTCTCCTTTGTTGGCTTGTTTGGAGACCGGAGATGGGATTTTATAGCCAAAGTTTCAGGTTTGAATAGAACAGGTAAGAGCTGCAGGTTACGGTGGGTTAATTACCTGCATCCTGGTCTCAAAAGGGGGAAGATGACACCCCAAGAAGAGCGCCTTGTCCAGGAGCTTCACTTGAAATGGGGAAATAGATGGTCAAGAATTGCTCGCAAATTACCAGGACGCACGGACAATGAGATTAAGAATTACTGGAGAACTCACTTGAGGAAGAAGGCCCAGGAGAAAAAGCGAGCAGCCATTTCATCACCAATGTCCTCCAGTTGTCATTCCTCGCTATCATCAAATAACCATAGCGTGGATTCATATCCACCCAAAAAGACAGGAGAAGAAAGCTTTTATGACACAGGAGGTCCTAAAATAATATCCTCGACAGACATAAAGATAGGGGAAGAACAGGTAGGTGAACAGGCGTACTCTTTGGATGATATATGGAAAGATATTGCTGTGTCAGAGGAGAACCCTCTGCAGCCAGTCTATGATGGGCACAGTGAAGAGGGTTGCAACTTCTCTTGTCCTCTAATGCCTTCTCCATCATGGGAATACTCTTCAGACTCGCTATGGGTGATGAATGAAGGGGAAACAAACAAGTTGAAATCTCAAGAAACTTCCAATAGGGAGGTCGTACGTTTTGGATGTAAAATATCAAGAACCTGTTTGTTTGCTATGATTTTTAATCTGATCAAAATCTCTTAG 807 0.4349 MVQQEIRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVQELHLKWGNRWSRIARKLPGRTDNEIKNYWRTHLRKKAQEKKRAAISSPMSSSCHSSLSSNNHSVDSYPPKKTGEESFYDTGGPKIISSTDIKIGEEQVGEQAYSLDDIWKDIAVSEENPLQPVYDGHSEEGCNFSCPLMPSPSWEYSSDSLWVMNEGETNKLKSQETSNREVVRFGCKISRTCLFAMIFNLIKIS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3808 268 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Bisa02g3808 268 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Bisa02g3808 268 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Bisa02g3808 268 MobiDBLite consensus disorder prediction 117 140 - -
Bisa02g3808 268 FunFam MYB transcription factor 63 130 - -
Bisa02g3808 268 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Bisa02g3808 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Bisa02g3808 268 Gene3D - 8 60 - -
Bisa02g3808 268 SMART sant 60 108 IPR001005 -
Bisa02g3808 268 SMART sant 7 57 IPR001005 -
Bisa02g3808 268 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Bisa02g3808 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Bisa02g3808 268 CDD SANT 63 106 IPR001005 -
Bisa02g3808 268 CDD SANT 10 55 IPR001005 -
Bisa02g3808 268 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 122 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa02g3808 268 Gene3D - 63 131 - -
Bisa02g3808 268 MobiDBLite consensus disorder prediction 113 155 - -
Bisa02g3808 268 FunFam Myb transcription factor 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3808 Bisa-ChrBisa02 91840978 91842739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3808 1 232 MYB Transcription Factor Family AT5G59780 60.086 1.40e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3808 Myb_DNA-binding 7.4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3808 02 91840978 91842739 Bisa12g1350 12 23329064 23330072 CCT