Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3805 ATGCCGATTTCTAGGATCGCCATTGGAAATGCATCGGAGCTTGGCCAAGCCGATGCTCTCAAGGCTGCTCTGGCTGAGTTCATTTCAATGCTCATCTTCGTCTTCGCCGGCGAAGGCTCCGGCATGGCATTCAGCAAGCTCACGGACAATGGCTCGACCACACCGGCTGGGCTAGTGGCAGCAGCACTGGCTCATGCCTTCGCACTGTTTGTGGCTGTGTCCGTCGGAGCCAACATTTCCGGTGGGCACGTGAACCCTGCGGTCACGTTCGGTGCTTTCGTCGGTGGCCACATCTCGCTGCTCAGAAGCATTTTGTACTGGATCGCTCAATTGCTTGGCTCTGTTGTGGCGTGCTTGCTTCTTAAATTTGCCACCGGTGGAATGGAAACATCTGCTTTCGCATTGTCTTCTGGCGTGGGTGCATGGAACGCAGTAGTGTTTGAGATTGTGATGACTTTCGGTCTCGTCTACACAGTGTACGCAACTGCCGTTGACCCAAAGAAGGGTGACATTGGAACAATTGCTCCCATCGCTATTGGTTTCATTGTGGGTGCTAACATCTTGGCCGGCGGTGCCTTCGACGGTGCATCCATGAACCCGGCCGTCTCTTTTGGACCGGCTGTGGTTAGCTGGACATGGACCAACCACTGGGTCTACTGGCTTGGTCCATTTGTTGGTGCTGCCATTGCTGCCATTGTGTATGAGATATTCTTCATCAGCCGCAACACACATGAGCAGCTCCCCACCACAGATTATTAG 759 0.5389 MPISRIAIGNASELGQADALKAALAEFISMLIFVFAGEGSGMAFSKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHISLLRSILYWIAQLLGSVVACLLLKFATGGMETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWLGPFVGAAIAAIVYEIFFISRNTHEQLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3805 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Bisa02g3805 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa02g3805 252 SUPERFAMILY Aquaporin-like 18 244 IPR023271 -
Bisa02g3805 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bisa02g3805 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3805 Bisa-ChrBisa02 91821952 91824631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3805 1 252 Major Intrinsic Protein MIP AT4G01470 79.365 3.78e-145 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1349 12 23298981 23300993 Bisa02g3805 02 91821952 91824631 CCT