Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3801 ATGGATAATTTGGTCATTTCAAGTGTACGTATATATAATGCTCGCCTTTCCTCCTGCGACCCAAACCCTAGTTACCGCTGCTTCACTCACTCAGAGCTTCTGTTTCAACAACCGATGGCTCCGTCTAAAGTTGATAGTTCGAAGAAGGCTGATCCAAAGGCTCAGGCCTTGAAAACTGCTAAAGCAGTCAAGTCAGGCCCTACCTTCAAGAAGAAGGCCAAGAAAATCCGAACATCTGTCACCTTCCATCGGCCAAAGACTTTGAAAAAGCCTAGGAACCCCAAATACCCTCGTATTAGTGCACCACCAAGGAATAAGCTTGATCATTATCAAATTTTAAAATATCCTCTCACCACTGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACCTGCGTGCTGACAAGAAGAAGATAAAGGATGCGGTGAAGAAAATGTATGACATCCAAGCTAAGAAAGTAAATACATTGATCAGGCCTGATGGCACCAAGAAGGCCTATGTCAGATTGACACCTGATTATGACGCCTTGGATGTAGCAAACAAAATTGGGATTATCTAA 579 0.4249 MDNLVISSVRIYNARLSSCDPNPSYRCFTHSELLFQQPMAPSKVDSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKPRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3801 192 PANTHER 60S RIBOSOMAL PROTEIN L23A 44 192 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa02g3801 192 NCBIfam 50S ribosomal protein L23 116 192 IPR019985 GO:0003735|GO:0005840|GO:0006412
Bisa02g3801 192 ProSitePatterns Ribosomal protein L23 signature. 170 185 IPR001014 GO:0019843
Bisa02g3801 192 Gene3D - 73 192 IPR012677 -
Bisa02g3801 192 Hamap 50S ribosomal protein L23 [rplW]. 112 192 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa02g3801 192 Pfam Ribosomal protein L23, N-terminal domain 53 102 IPR005633 -
Bisa02g3801 192 Pfam Ribosomal protein L23 112 174 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bisa02g3801 192 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 109 185 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bisa02g3801 192 FunFam 60S ribosomal protein L23a 71 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3801 Bisa-ChrBisa02 91761920 91764383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3801 39 192 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 88.961 1.90e-71 211