Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3795 ATGGAGATTGATCTCACTCCCCGGTTGCCCAAGAAGGTGAGCGGAGGCGATGGTGGGTCTTACTATGCCTGGTGTCCTTCCGAGCTTCCCATGTTACGCCATGGCAACATTGGTGCCGCCAAGCTCGCCCTCGAGAAGAATGGTTTTGCGCTTCCTTGCTACTCTGACTCTCCCTCCGTTGTCTACATTCTCCAAGGACAGGGAGTTGTAGGAATCGTGCTCCCTGAATCAGAAGAGAAGGTTCTTCCAATTAAGAAGGGTGATGCAATAGCAGTCCCTTTTGGTGTTGTGACATGGTGGTACAACAATGGGGATACTGAGTTGGTTGTTCTTTTCCTGGGCGACACTTCAAAGGCTCACAAAGCTGGTGAATTCACCAACTTCTTCCTGACTGGTTCTAAAGGAATCTTTTCTGGCTTTTCTCCTGAGTTTGTGGGCAGAGCTTGGGACCTGGAAGAGAAGGATGTTAAGACCCTTGTTGGAGGCCAATCAGGCAGTGGAATTGTGAAGCTTGATGGGAAGATCAACCTTCCTGAGCCAAAGCAGGATCATCGTAAGGATATGGCATTGAACTGTGAAGAGGCTCCCTTGGATGTTGACATTAAGAATGGTGGAAGAGTAGTGGTTTTGAACACCAAGAATCTTCCATTGGTGGGTCAAGTTGGACTTGGAGCAGATCTTGTTAGATTGGACGGAAGTGCCATGTGCTCTCCTGGGTTTTCTTGTGACTCTGCCTTACAGGTTACTTACATTGTCAGAGGAAGTGGCCGAGTTCAGGTTGTTGGTCCTGATGGCCGCAGAGCCTTAGACACAACAGTAAAAGCTGGTAATCTGTTCATTGTACCAAGGTTCTATGTGGTCTCAAAGATTGCTGATCCTGATGGAATGGAGTGGTTCTCTATCATCACCACCCCTGATCCCGTTATTACCAACTTGGCTGGAAGTTCTTCAGCGTGGAAGGCTTTATCTCCAACGGTACTGCAAGCTGCCTTCAATGTGGATTCAAAACTTGAACAACTCTTCCGTTCAAAGAGGACTGCTGATGCCGTTTTCTTCCCTCCACCAAAGTAG 1071 0.4818 MEIDLTPRLPKKVSGGDGGSYYAWCPSELPMLRHGNIGAAKLALEKNGFALPCYSDSPSVVYILQGQGVVGIVLPESEEKVLPIKKGDAIAVPFGVVTWWYNNGDTELVVLFLGDTSKAHKAGEFTNFFLTGSKGIFSGFSPEFVGRAWDLEEKDVKTLVGGQSGSGIVKLDGKINLPEPKQDHRKDMALNCEEAPLDVDIKNGGRVVVLNTKNLPLVGQVGLGADLVRLDGSAMCSPGFSCDSALQVTYIVRGSGRVQVVGPDGRRALDTTVKAGNLFIVPRFYVVSKIADPDGMEWFSIITTPDPVITNLAGSSSAWKALSPTVLQAAFNVDSKLEQLFRSKRTADAVFFPPPK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3795 356 PANTHER OS03G0336100 PROTEIN-RELATED 10 355 - -
Bisa02g3795 356 CDD cupin_11S_legumin_N 4 173 - -
Bisa02g3795 356 Gene3D Jelly Rolls 3 194 IPR014710 -
Bisa02g3795 356 SMART Cupin_1_3 195 339 IPR006045 -
Bisa02g3795 356 SMART Cupin_1_3 3 157 IPR006045 -
Bisa02g3795 356 CDD cupin_11S_legumin_C 198 353 - -
Bisa02g3795 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Bisa02g3795 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Bisa02g3795 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Bisa02g3795 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Bisa02g3795 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Bisa02g3795 356 Pfam Cupin 199 337 IPR006045 -
Bisa02g3795 356 Pfam Cupin 10 156 IPR006045 -
Bisa02g3795 356 SUPERFAMILY RmlC-like cupins 16 345 IPR011051 -
Bisa02g3795 356 FunFam Glycinin G1 192 356 - -
Bisa02g3795 356 Gene3D Jelly Rolls 195 356 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3795 Bisa-ChrBisa02 91698597 91701290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3795 35 336 Miscellaneous Gene Families AT2G18540 23.343 4.08e-10 59.3