Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3785 ATGAGTCGTTCGATCGAAAGGGTTAAGGTTCATGAGCTCAGAAACAAAACGAAAGCAGAGCTTCTGAACCAGTTGAAGGATCTCAAAGCAGAGCTTGCTCTTCTCCGCGTCGCCAAGGTCACTGGCGGAGCACCCAATAAGCTTTCCAAAATCAAGGTGGTTCGGCTTTCAATAGCGCAGGTTTTGACAGTGATTTCCCAGAAGCAAAAAGCAGCTTTGCGGGAAGCTTACAAGAATAAGAAGTACCTGCCTTTGGATCTGCGTCCCAAAAAGACCAGAGCCATCAGACGGCGGCTTACCAAGCACCAGGCATCTTTGAAGACTGAGCATCAGAAAAAGAAGGAATTGTACTTTCCTTTGAGAAAATATGCAGTTAAGGTGTGA 384 0.4635 MSRSIERVKVHELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEHQKKKELYFPLRKYAVKV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3785 127 PANTHER 60S RIBOSOMAL PROTEIN L35 6 127 IPR045059 GO:0000463|GO:0022625
Bisa02g3785 127 SUPERFAMILY Ribosomal protein L29 (L29p) 8 69 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bisa02g3785 127 Pfam Ribosomal L29 protein 12 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bisa02g3785 127 Gene3D - 82 127 - -
Bisa02g3785 127 Coils Coil 11 38 - -
Bisa02g3785 127 FunFam 60S ribosomal protein L35 82 127 - -
Bisa02g3785 127 FunFam 60S ribosomal protein L35 5 81 - -
Bisa02g3785 127 Gene3D - 5 81 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bisa02g3785 127 NCBIfam 50S ribosomal protein L29 12 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bisa02g3785 127 Hamap 50S ribosomal protein L29 [rpmC]. 8 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bisa02g3785 127 CDD Ribosomal_L29_HIP 12 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3785 Bisa-ChrBisa02 91463196 91467603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3785 5 127 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 85.366 4.02e-71 207