Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3753 ATGTTAGATCTTAATCTCAATGCGGATTCGACTCCGAACGATAACTTGGTCATGTTTTTCGACAAATTTCCCGAAGCTTCCGGGAATCAAATGGCGGAATCGGGGACCTCCAATTCCTCTGTCGTCAATGCCGACGGGTCCAGCACTGGAGGAGGCGATGATGACTCGTGCTCTACCCGCGCCGGCGACGTATTCACAATTAATTTCGATATCCTTAAAGTGGAAGGCGGGAACGACTTCGCAACGAAGGAGCTATTTCCGACCAGTGGAGCGAAAGGAGTGGGCAGCGAGTCTGGGAATTGGCAGGGGCAGTCTTCGTCGTCCTTTCCATCAAAGAAGAGCTGGATGGATCTCTCATTCGATAATCAAGGTGGCAGCGCAGAAATGAAGATGATTCAACTTCAGCAACAACCTCAGCAGCAGGTGAAGAAGAGTAGGAGGGGTCCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTACCGAAGGACCGGAAGATGGGAATCACATATCTGGGATTGTGGAAAACAAGTCTATTTAGGTGGATTTGACACTGCACATGCCGCTGCTAGGGCCTATGATCGAGCTGCCATTAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAACCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTTACCAAGGAGGAGTTCGTTCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGAAGTTCAAAATACCGAGGAGTAACTCTGCACAAATGTGGCCGCTGGGAAGCTCGGATGGGACAATTCCTTGGCAAAAAGTATATATACCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAAGCGGCTATCAAGTGCAACGGAAGGGAGGCAGTTACTAACTTCGAGCCAAGTACTTATGAAATGGAGATGAACTCTGAAGCTATTAATAAAGTTGGCAGTCACAATCTTGACCTCAATTTGGGCATATCCACTTCAGGCAATTGTCCCAATGAAAACAGAGGGCATTTTCAGTTCCAGTCTGTTCCTTACGACATGCATGCGGGAAGAAGTTCAAGGATGGAGAGCAGCACTGATTCAGCAATTGGCCATCCATCTATGAAAAAGCGGGTAGTGACTGAAGATCGTCCTTCTGTTTGGAATGGCCTTTACCCTAGTTTCTTTCCCAATGAGGAAAGAGTAGAGACAATCGGCATAGTTCCTTCACAAGGACCCCCCACCTGGGCGTGGCAAACATATGGCCAGGTCACGGCTTCCCCAGTACCACAGGTCTCTACTGCAGCATCATCAGGATTCTCCATTTCGGGGATGTTTCAAAAATAG 1347 0.4818 MLDLNLNADSTPNDNLVMFFDKFPEASGNQMAESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVFTINFDILKVEGGNDFATKELFPTSGAKGVGSESGNWQGQSSSSFPSKKSWMDLSFDNQGGSAEMKMIQLQQQPQQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEMEMNSEAINKVGSHNLDLNLGISTSGNCPNENRGHFQFQSVPYDMHAGRSSRMESSTDSAIGHPSMKKRVVTEDRPSVWNGLYPSFFPNEERVETIGIVPSQGPPTWAWQTYGQVTASPVPQVSTAASSGFSISGMFQK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3753 448 MobiDBLite consensus disorder prediction 29 55 - -
Bisa02g3753 448 CDD AP2 155 213 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 CDD AP2 246 306 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 Gene3D AP2/ERF domain 246 305 IPR036955 GO:0003700|GO:0006355
Bisa02g3753 448 Gene3D AP2/ERF domain 154 212 IPR036955 GO:0003700|GO:0006355
Bisa02g3753 448 SUPERFAMILY DNA-binding domain 154 212 IPR016177 GO:0003677
Bisa02g3753 448 ProSiteProfiles AP2/ERF domain profile. 155 211 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 FunFam AP2-like ethylene-responsive transcription factor 154 213 - -
Bisa02g3753 448 ProSiteProfiles AP2/ERF domain profile. 247 304 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 MobiDBLite consensus disorder prediction 28 57 - -
Bisa02g3753 448 FunFam AP2-like ethylene-responsive transcription factor 246 306 - -
Bisa02g3753 448 MobiDBLite consensus disorder prediction 93 113 - -
Bisa02g3753 448 SUPERFAMILY DNA-binding domain 246 305 IPR016177 GO:0003677
Bisa02g3753 448 PRINTS Ethylene responsive element binding protein signature 286 306 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 PRINTS Ethylene responsive element binding protein signature 248 259 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 MobiDBLite consensus disorder prediction 89 113 - -
Bisa02g3753 448 SMART rav1_2 247 310 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 SMART rav1_2 155 217 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 Pfam AP2 domain 155 203 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 Pfam AP2 domain 246 296 IPR001471 GO:0003700|GO:0006355
Bisa02g3753 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 111 336 - -
Bisa02g3753 448 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3753 Bisa-ChrBisa02 90897643 90901051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3753 70 334 AP2-EREBP Transcription Factor Family AT4G36920 66.423 3.57e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa02g3753 AP2 2.6e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1305 12 22418626 22422128 Bisa02g3753 02 90897643 90901051 CCT