Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3747 ATGATTTCGTCACGCATTGTTTGTCTTTCTGATCAAGGAAGTAAAGATTTGGAGTCAAGATCCATTTTCCGTTTGTTTCCCGGGAAAATGGACAAGTTCATCGACGACTTGCCGCCGATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTTCAACTTATCATGCCCGTCGAGTCCGCTCACCGAGCCGTCTCTTATTTAGGCGAGCTTGGTCTCCTGCAATTCCGAGATTTAAATGATGACAAAAGTCCCTTCCAGAGAACCTTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAACAAGGCTGGTCTGATGTCTTCACCTCATCCTGTCTTGCAACCTGACATTGAGTTGGAGGAACTAGAGATACAACTTGCTGAGCATGAACATGAGCTGAATGAAATGAACTCCAATAGCGAGAAACTTCGGCAGTCATATAATGAGCTCCTAGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTGTCTACTCATAGCCATGCAGCGGTAGAGGAGAGAGAACTGGAGGAGAATGTATATTCAAATGATGATTATGTTGAGACAGCATCTTTGCTTGAACAGGACACGAGGCCTGGACCATCAAATCAATCTGGTTTAAGTTTTATCAGTGGGATAATTAGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAACCAGGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAACAGAGATGATTGAGAAAACAGTGTTCGTAGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATATGCGAGGCATTTGGCGCAAATTGTTACCCTGTTCCTGAAGATATACATAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGTTGACTTAGAAGCAACTTTGGATGCTGGTATCAGGCACCGGAATAAGGCCCTTGCTACCATAGGGGGTCACCTAGCAAAATGGATAAATATGGTAAGAAGAGAGAAGGCAGTGTATGATACACTGAACATGCTTAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGATGGTGCCCCATGTTTGCAAAAACGCAGATTCAGGAGGCACTGCATCGTGCAACTTTTGATAGTAATTCTCAAGTTGGCATAATCTTTCATCCTATGGATACAATGGAATCGCCACCTACTTATTTTAGAACCAACCATTTCACAAGTGCATATCAGGAAATTGTTGATGCATATGGCGTTGCAAGGTACCAAGAAGCAAATCCTGCAGTTTACACAGTAATTACATTTCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGTCTGTTGCTGGGAGCACTAGTTCTTATAGCACGCCAAAGCAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTCTTTGGAGGGCGCTATGTGCTTCTTTTGATGTCACTCTTTTCAATCTATTGTGGGCTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTGCATCTGCTTACAAATGCCGAGATGCTACGTGCAGGGATGCACATATTGCTGGCTTAGTCAAATACCAAAATCCATACCCCTTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGTTCAGAATTGCCTTTCCTGAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCACAGATGAACTTAGGAATCTTGTTAAGTTACTTCAATGCACGTTTCTTTGGCAACTCATTGGATATAAGGCACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGATCTCAAGCAGACCTCTATCATGTAATGATTTACATGTTTTTAAGCCCCACTGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAGATTATGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAAAAGCTTCACACAGAGAGATATCAAGGACGAGCTTATGATAGGCTTAATACATCTGAGATGGATCTTGAGGTGGAACCAGATTCTGCCAGGGCCAGGCAACATCATGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATCCATTCTATTGAGTTTGTTCTAGGTGCAGTTTCAAATACAGCATCATATCTTCGACTCTGGGCATTAAGCTTGGCTCACTCGGAACTTTCTACTGTTTTTTATGAGAAAGTCCTCCTTCTTGCTTGGGGGTATGACAATCTTGTAATTCGGTTAGTGGGCCTAGCTGTTTTTGCCTTCGCAACTGCATTTATACTACTCATGATGGAGACCCTCAGTGCTTTCCTTCATGCCCTCCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTATCATGGTGATGGCTATAAGTTCAGACCTTTTTCCTTTGCCTCCTTAGCCGAGGACGATGATTGA 2553 0.4211 MISSRIVCLSDQGSKDLESRSIFRLFPGKMDKFIDDLPPMDLMRSEKMTFVQLIMPVESAHRAVSYLGELGLLQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSPHPVLQPDIELEELEIQLAEHEHELNEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSTHSHAAVEERELEENVYSNDDYVETASLLEQDTRPGPSNQSGLSFISGIISKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDIHKQRQITREVSSRLVDLEATLDAGIRHRNKALATIGGHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKTQIQEALHRATFDSNSQVGIIFHPMDTMESPPTYFRTNHFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDATCRDAHIAGLVKYQNPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGILLSYFNARFFGNSLDIRHQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIMLLLLAVIAVPWMLFPKPFILKKLHTERYQGRAYDRLNTSEMDLEVEPDSARARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLAEDDD 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3747 850 Pfam V-type ATPase 116kDa subunit family 66 842 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bisa02g3747 850 PIRSF ATP6V0A1 38 850 IPR026028 GO:0000220|GO:0046961
Bisa02g3747 850 PANTHER VACUOLAR PROTON ATPASES 42 848 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bisa02g3747 850 Coils Coil 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3747 Bisa-ChrBisa02 90791346 90803905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3747 30 843 Primary Pumps ATPases(2) AT2G28520 80.736 0.0 1368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1296 12 22212909 22225102 Bisa02g3747 02 90791346 90803905 CCT