Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3742 ATGAATGGAACGAGAATAACTCGAATTTTGTTAATGCTTTCTCTTCTTGCAAGTCATCTCATTCCCCCACACGCATATATACACAAGAGCCACATCCTTCAAACTGATTCACTGAGGCCACCTCATTTTATTGTATGGATGGATCCTTCAGCTGCACAACACCAGCAAATGTCTAGCCAGTCACTGGAGAACATGTTATCTTGTTCGAAGGCACAGAATCAGGAGAGGAAGCCAAGACCACAGCCTGAACAGGCCCTGAAATGCCCCAGATGTGACTCTACCAACACAAAATTCTGTTACTACAACAATTACAGCCTTTCTCAACCCAGATATTTCTGCAAGTCTTGCAGAAGATATTGGACCAAAGGAGGAACCCTGAGGAATGTTCCAGTGGGTGGAGGCTGCAGGAAGAACAAAAGGTCCTCCTCCTCCTCATCATCTTCAGCATCAAAACGAGCTCAAGATCAAACGCTCACACCCAATTCCAACCCACTCATAACTACCCTCCCTGCTCCATTATCTTATGACTCCAATGACCTCACTCTTGCTCTAGCTAGGCTCCAAAGGCAATCATGTGGCCAATTGGATTATGATGATCATGATTTCTCTGTTCTGGGAAACCCTTTTGGGAATATTTCTTCCACAAACACCGGATTTTTGGACGCACTTCGTAGTGGGTTTCTGGAAAACCAGAATAGCAGTCTTCAGAATCTGTACTATGGATATGGAAATGGAGACTTGGGAGAGGTGGATAATGGAAGTAATAATGCTTGTGGGGTTAATGGGGTAAGTGGAGAGATGATGTTTCCGCATGATCAAGAAGTGAGTAATGCTACCACTCAAGCAGTGAGTGTCACCACCATCAAGCAAGAACTTTGCCATGACAGAGAACAAGGTGAAACTAAGGTTTTCTGGGGTCTTCCATGGCAGCTCAATGGAGACACAAACATGGGTGAAATTGATTCAGGAAGACCAAACTGGAACGGTCTCAATTCATCTTGGCATGGGCTTCTTAATAGTCCTCTAATGTAA 1032 0.4438 MNGTRITRILLMLSLLASHLIPPHAYIHKSHILQTDSLRPPHFIVWMDPSAAQHQQMSSQSLENMLSCSKAQNQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSASKRAQDQTLTPNSNPLITTLPAPLSYDSNDLTLALARLQRQSCGQLDYDDHDFSVLGNPFGNISSTNTGFLDALRSGFLENQNSSLQNLYYGYGNGDLGEVDNGSNNACGVNGVSGEMMFPHDQEVSNATTQAVSVTTIKQELCHDREQGETKVFWGLPWQLNGDTNMGEIDSGRPNWNGLNSSWHGLLNSPLM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3742 343 Pfam Dof domain, zinc finger 84 140 IPR003851 GO:0003677|GO:0006355
Bisa02g3742 343 MobiDBLite consensus disorder prediction 137 165 - -
Bisa02g3742 343 MobiDBLite consensus disorder prediction 131 165 - -
Bisa02g3742 343 MobiDBLite consensus disorder prediction 56 87 - -
Bisa02g3742 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 61 239 IPR045174 GO:0003700|GO:0006355
Bisa02g3742 343 MobiDBLite consensus disorder prediction 56 75 - -
Bisa02g3742 343 ProSiteProfiles Zinc finger Dof-type profile. 86 140 IPR003851 GO:0003677|GO:0006355
Bisa02g3742 343 ProSitePatterns Zinc finger Dof-type signature. 88 124 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3742 Bisa-ChrBisa02 90708807 90710606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3742 84 343 C2C2-Dof Transcription Factor Family AT2G28510 44.043 4.94e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa02g3742 zf-Dof 7.6e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1295 12 22173984 22174844 Bisa02g3742 02 90708807 90710606 CCT