Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3713 ATGGCCTCCTCCAAAAATTCCAAGACGGAAAAGAAAGCAACAGTTGCAGAAAGATCCAAAACAGCGAGTAAAGCCACTAAGCCTAGAAAGGAGAAGCACTCGGAGAAGAAAAAGAAGAGCAATAAGAAGAAAAAGCTTGTCAATTGCGATGTGAAGGAAGATGAAGCAATCATTGTTCCGTCTTCCAGTATTGAGTCCCGCGACAAAGAAGAAGAACAAGAGGAGGGGCGTGATGAAGACAAGACTGAGATCACAAATGGACGAACCAGCGGAACGAAATCCAAGAGTGGCAAAGCCAAAGGAATGAAAGACGATGACGAAAATGAAGATGAAGCTGAAGGCAACGAAGACGCCAAAGGTAATGTGTTTCCGATGAATCGTATCAGGACAATAATTAGGGGCCGAGATCTTGATATGCGTATTTCCCAGGAGGCTATATTTGTCATCAACAAAGCCACGGAGAAGTTCCTTGAACAATTTACACGAGACGCTCATGCAGCCTGTGCTCGGGATCGAAAGAAATCTCTTGCTTACAAGCACCTATCATCTGTTGTGAGCAAGCAGAGCATATACGACTTTCTTTCAGATTTTGTTCCTGAGAAATTAAAAGCCGAGGATGCATTAAGAGAGAGAAATTCCGGCGTGACTGGTGATTAG 657 0.4384 MASSKNSKTEKKATVAERSKTASKATKPRKEKHSEKKKKSNKKKKLVNCDVKEDEAIIVPSSSIESRDKEEEQEEGRDEDKTEITNGRTSGTKSKSGKAKGMKDDDENEDEAEGNEDAKGNVFPMNRIRTIIRGRDLDMRISQEAIFVINKATEKFLEQFTRDAHAACARDRKKSLAYKHLSSVVSKQSIYDFLSDFVPEKLKAEDALRERNSGVTGD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3713 218 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 123 185 IPR003958 -
Bisa02g3713 218 Gene3D Histone, subunit A 68 200 IPR009072 GO:0046982
Bisa02g3713 218 MobiDBLite consensus disorder prediction 25 45 - -
Bisa02g3713 218 SUPERFAMILY Histone-fold 91 194 IPR009072 GO:0046982
Bisa02g3713 218 MobiDBLite consensus disorder prediction 10 24 - -
Bisa02g3713 218 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 75 212 - -
Bisa02g3713 218 MobiDBLite consensus disorder prediction 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3713 Bisa-ChrBisa02 90253681 90259170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3713 86 181 CCAAT-HAP5 Transcription Factor Family AT1G07980 41.667 5.31e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa02g3713 CBFD_NFYB_HMF 8.7e-14 CL0012