Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3710 ATGGATTCTGCGGGTATTTATGCCCTTATTATTGCTGTTATCATCAGTACTGGTATTAATCCTGAGGCCAAATTTTATTACCTCTTTGATGGTTATGCACGTCTCTCCTCTGGTCTTGCCTGTGGGCTGGCTGGTCTTTCTGCTGGCATGGCTATTGGAATCGTTGGTGATGTTGGAATTATAGCTAATGCCCAGCAACCAAAACTTTCTTTTACCGTGCTGGTTCCCTGTTATGGACACCACTATGGTGGTATGGTGGAGGATCCGAAAAGTAATATTCTGGCATTGTTGGCACTATCTTCTTTGAGCTGA 312 0.4391 MDSAGIYALIIAVIISTGINPEAKFYYLFDGYARLSSGLACGLAGLSAGMAIGIVGDVGIIANAQQPKLSFTVLVPCYGHHYGGMVEDPKSNILALLALSSLS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3710 103 CDD ATP-synt_Vo_c_ATP6C_rpt2 28 69 - -
Bisa02g3710 103 NCBIfam V-type ATPase subunit C 5 60 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bisa02g3710 103 SUPERFAMILY F1F0 ATP synthase subunit C 26 75 IPR035921 -
Bisa02g3710 103 Pfam ATP synthase subunit C 36 76 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bisa02g3710 103 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 74 - -
Bisa02g3710 103 Gene3D - 1 78 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3710 Bisa-ChrBisa02 90230057 90231820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3710 5 69 Primary Pumps ATPases(2) AT4G38920 89.231 1.17e-34 114