Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3709 ATGTCTCTTACGACCACCGTGCCTTGGTCGTCGATGGCAAGCGTCGCCTCTTCATCTCCGGCGCTATTCATTACCCTCGTAGTACTCCCGAGGTTTCAAGAATTTGGTGCATCACAGCCTTATAGACCCACAGAAGATGTTGCATTTTCCGCTGCACGCTTTTTCCAGAGGGGTGGAACGTTTAATAATTACTATATGCCTAAGTGGGGCCACTTGAAAGATTTGCATAAGGCCTTAATGCTTTGTGAAGAAGCAATGATGGCCACTGATCCCAACATTACATCACCTGGTCAAAATCTAGAGGTTGCAGTTTACCAGATAGGATCTCTATGTGCAGCCTTTCTTACCAATTTGGATAAAACATCTGATGCAACAATTAATGCTGCATCTATGATTCCAAGCTTCACAAGAGAATATTTAGGAGAAGATAGTAATTCTTCAAAAGGATCTAACCAAACATGTTCTTCAAAAGGGTCTAACCAAGTATGTTCTTCAAAAGGGTCTAACCAAATATGGCATTGGTTTAGTGAACCAGTGGGGATTTCAAGGGCTGATGCATTCACAAGAAGTGGATTGCTAGAACAAATAAATACAACAGCAGATAGAAGTGATTACTTGTGGTACAGCATTGATCTTGACCTTCAAGAAGATGGTGGCCCTCAAACTGTCCTTCACATTGAGTCACTTGGTCATGTCATTTATGCCTTCATCAATGGAAAGCTTGCAGGAAGTGGAATACGCGATGCTGCCAAAGTTTTGGATGTTCCAGTCACCCTTGTAGCTGGGAAGAACAAAATTGATCTCCTAAGTTTAACTGTGGGACTTCAGAACTATGGAGCCTTTTTCGACACAGCGGGTGCAGGAATCACTGGTCCAGTTATATTGAATGGTTTGAAAAATGGGAGCACACTTAATATGACTTCCCAACAATGGACATATCAGGTTGGTCTTAGTGGTGATCACTTAAATCTACCTGATGGAATTTCTGGACAGTGGAACACACCTTCTAACAACTTACCTACGAAAAGACCATTGACTTGGTACAAGTCACACTTTCTTGCTCCTCATGGCAATAATCCTGTGGCAATTGACTTCACGGGTATGGGGAAAGGTGAGGCTTGGATAAACGGACATAGCATAGGGCGATTTTGGCCCACATATGTTGCTCCGAACGATGGCTGCTCAGACGCATGCAATTACAGAGGGGATTATAGTAATTCCAAGTGTTTGAGGAATTGTGGAAAGCCATCACAAACATTATACCACGTACCGCGCTCGTGGTTGCATCCAAGAGACAATATAATTGTACTGTTTGAGGAAATTGGAGGTGATCCAACACTTATAACTTTTGCTACGAGACATATAGGAAGCCTATGCGCCCATGTTTCAGACTCTCACCCACCACCTGTAGACTTGTGGAATTCAGACACAAAATCAAAGAGAAAACTAGGGCCCGCACTTTCAATCCAATGTCCTAGTCCAGATCAGGCATGCATTGGAAAAAGAAGCTGTAGTATTGAAGTGTCGATCGATACATTCGGGGATCCATGCAGCGGAGTGGCAAAGAGTTTAGCAGTGGAAGTTGCTTGTACATAG 1596 0.4323 MSLTTTVPWSSMASVASSSPALFITLVVLPRFQEFGASQPYRPTEDVAFSAARFFQRGGTFNNYYMPKWGHLKDLHKALMLCEEAMMATDPNITSPGQNLEVAVYQIGSLCAAFLTNLDKTSDATINAASMIPSFTREYLGEDSNSSKGSNQTCSSKGSNQVCSSKGSNQIWHWFSEPVGISRADAFTRSGLLEQINTTADRSDYLWYSIDLDLQEDGGPQTVLHIESLGHVIYAFINGKLAGSGIRDAAKVLDVPVTLVAGKNKIDLLSLTVGLQNYGAFFDTAGAGITGPVILNGLKNGSTLNMTSQQWTYQVGLSGDHLNLPDGISGQWNTPSNNLPTKRPLTWYKSHFLAPHGNNPVAIDFTGMGKGEAWINGHSIGRFWPTYVAPNDGCSDACNYRGDYSNSKCLRNCGKPSQTLYHVPRSWLHPRDNIIVLFEEIGGDPTLITFATRHIGSLCAHVSDSHPPPVDLWNSDTKSKRKLGPALSIQCPSPDQACIGKRSCSIEVSIDTFGDPCSGVAKSLAVEVACT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3709 531 Pfam Galactose binding lectin domain 496 530 IPR000922 GO:0030246
Bisa02g3709 531 PANTHER BETA-GALACTOSIDASE RELATED 67 475 IPR001944 GO:0004553|GO:0005975
Bisa02g3709 531 Gene3D - 183 312 - -
Bisa02g3709 531 SUPERFAMILY Galactose-binding domain-like 310 476 IPR008979 -
Bisa02g3709 531 ProSiteProfiles SUEL-type lectin domain profile. 449 531 IPR000922 GO:0030246
Bisa02g3709 531 CDD Gal_Rha_Lectin_BGal 496 530 - -
Bisa02g3709 531 Gene3D - 456 531 IPR043159 -
Bisa02g3709 531 SUPERFAMILY Galactose-binding domain-like 189 297 IPR008979 -
Bisa02g3709 531 Gene3D - 328 455 - -
Bisa02g3709 531 FunFam Beta-galactosidase 319 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3709 Bisa-ChrBisa02 90153343 90164769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3709 32 420 Glycoside Hydrolase AT2G28470 52.834 6.40e-147 436