Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3700 ATGCAGAAAGTACGAAGAAGATCAGTGAAGAACACAAGGCTTAACCAAAAGGATAAGGACATGATCAGCAAATTACCAGATGAAATCATCGTCAACATCTTATCGAGATTGACAACAAAAGAAGCAGCTAGGACTAGCATCCTCTCAACCAGATGGAGATACCTATGGCTGCATTTCCATGGCTTCTTAAACTTCGACAATTCCCTCAAAATACTTCGCATGCGTCACAAACAATGTGGGCAATTCCGAAAGACTTGGCTTTTTTTCACAGAATGGCAGAGCTTCATGAAGCGACTGGACAAGATTCTGGGATCAATTCGAAGTCCAACAGTCCAAGGATTAAGAATCTGCATTGATCTGGGCAACCCCATGAAGATTCCTGAATGGCTTGACTTTGCTTCAGAGAAGAAAGTTCGAATACTCGACTTAGATTTCACCTTCACCTATACATATCCGTTGATGACAACAAGTGACAATATCAGAAACACAGTGTCACCGTCTCTGCTTTTTGGTCCAAAGGGCTTCAAGTTTAAATCTTTGAATGTTCTTCGTCTGGCTTCTGTGGACATAACAGGAGAGACCCTCGAGCATTTTCTGTCTCGCTGTTCATCTCTTGAAACATTATGTGTCAGAGACTCCAGAACCCTAACAAGCCTGAAAGTGGTGTCTGGGAGTTTGAAACATTTGGAGTTGGTAGAATGCAACGTTTTACTTCTTGAAGTTTCTGCAGAAAATCTCGTGGCATTCACATACAGTGGAGATGTTTGTGTGTGTTTTCCCTTTAAGTGTGCTCCAAAACTTGAGGAAGTGTCCTTTGGTGCTCAGTATGCTAGATACGTGGAAACATGCATAAGGGATACTGATTTTTTTGGGTTATTCTCTCAGATAACTGTTCTGAAATTGGAACTAAGGATCCGAGATGAGACAATTCATGAAGACCTGCCTGAGTTCAGTAATGTGAAGCATTTGGAATTGTTGATTCCTCACGCTGGTGGGACAAATTTCAGACATCATGTTTCTCTACTGAGGGCGTTTCCTTCAATATGCAAGCTTGTACTGAAGTTCCACAGCTTCAGTATCTCAAGGAGGCCTGTGAGGAGGTTTGAGGCGAATATGAATCACGAATACCAAAGCCTGAAGGAATTGGAAGTGTGTGGATATAGAAGAGACCCCTCTCAGATTGAGCTTATAGTTTATATCCTTGAGAATGCTGGTAAACTCAAGACCATTGCTTTCGATCCAGTGTCACCATTTTACAGTGCAAGACCAGCAGAAGTGAAGAGCGTGATCAGAACATTGCGTCGTGATTCTGTCATATGGTTCGCTGATCGCCTTAAACCCTATATTCCTCCTTCAGTTCAATTGCTTGTCATGTAA 1377 0.4212 MQKVRRRSVKNTRLNQKDKDMISKLPDEIIVNILSRLTTKEAARTSILSTRWRYLWLHFHGFLNFDNSLKILRMRHKQCGQFRKTWLFFTEWQSFMKRLDKILGSIRSPTVQGLRICIDLGNPMKIPEWLDFASEKKVRILDLDFTFTYTYPLMTTSDNIRNTVSPSLLFGPKGFKFKSLNVLRLASVDITGETLEHFLSRCSSLETLCVRDSRTLTSLKVVSGSLKHLELVECNVLLLEVSAENLVAFTYSGDVCVCFPFKCAPKLEEVSFGAQYARYVETCIRDTDFFGLFSQITVLKLELRIRDETIHEDLPEFSNVKHLELLIPHAGGTNFRHHVSLLRAFPSICKLVLKFHSFSISRRPVRRFEANMNHEYQSLKELEVCGYRRDPSQIELIVYILENAGKLKTIAFDPVSPFYSARPAEVKSVIRTLRRDSVIWFADRLKPYIPPSVQLLVM 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3700 458 Pfam F-box domain 22 56 IPR001810 GO:0005515
Bisa02g3700 458 ProSiteProfiles F-box domain profile. 19 55 IPR001810 GO:0005515
Bisa02g3700 458 SUPERFAMILY RNI-like 131 413 - -
Bisa02g3700 458 PANTHER OS02G0105600 PROTEIN 18 456 - -
Bisa02g3700 458 SUPERFAMILY F-box domain 19 101 IPR036047 GO:0005515
Bisa02g3700 458 Gene3D - 6 100 - -
Bisa02g3700 458 Gene3D Ribonuclease Inhibitor 150 430 IPR032675 -
Bisa02g3700 458 Pfam FBD 377 411 IPR006566 -
Bisa02g3700 458 SMART fbox_2 25 66 IPR001810 GO:0005515
Bisa02g3700 458 CDD F-box_AtFBL13-like 22 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3700 Bisa-ChrBisa02 89967795 89969383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3700 20 208 EF-hand Containing Proteins AT5G41840 29.245 2.98e-10 60.5