Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3699 ATGTCCCAAGTCACAACTCACAAATTCACCACAAAAGCCGGCAGTAGCAGCTTTGAGCCTTCTTTCTATCGAACAAGGGTGATGACTGAGCACAATCCTATATACCTTTCTCGCACTCCCTCCGCTGTTTCTCTTTGCTCGCAGAGCTCAAACACCGGAGTCGGTCAGCATTCCCGACGGTCTTGCAAAATGGGGAATACCGCCAGCAGCGGAGGAGGCGGCGGCCGCAGTCACTGGCGCCGGCGCCACCGCCTTATTCAGCCTCCGCAATTGCAAATTACTGGAAGCGATTACCTTTCCGCCGCTTCCGCGTCCCGTTCTTCTCAATTCCAAAACTCCGTCACCCCTGGCATGACGGAAAATTTGGGTGATGGGCAGCTTCCGTGCGGGCCCATTTCCCCACCGATGGCGCCTTTTGTTGAGCATCAGAAAACGGTGACGATTAGGAATAGTGTGAATATCAAGAAGGAGACTCTGCGGTTTGAGCCTGATCAAGATTGCCCTGGGAGCTTCCTTGTAGCTTTCACCTTCGATGCCACTGCACCTGGAAGCATTACAGTTATGTTTTATGCCAAGGAAACTATAGAAGGTAAGCTGGAAGCAGTAAAGGAAAGCATGCTTAAACAAATCTCAATGCCATTTGAGCAAGGTCTCTGTCAGAGGTTTGTTCAACCTCCAGGAACTGGGATTGATTTCTCAATGTTAGAGGACAAGGGACTGACAAAAGATGGTGATGCTGAAATTTATCCTCTTGTGGTGAAGGCTGAGGCTCTGCCATTAGACCCTCATGAAACTGGGGGCAACCCATCTTTTCAAATCACTCTGGCAAGTTTTGAGAAGAGAGAGAAAGGTGACTACAAAGTCCAAGTAATGAAACAGATTCTCTGGGTTAATGGGAAGAGATATGAGCTGCAGGAGATATATGGCATTGGGAACGCAGGTGATGGTGATTTTGATGACCTTGAATCTGGAGGGGAATGTGTTATTTGTTTATCAGAACCACGGGACGTAACGGTTCTTCCTTGCCGACACATGTGCATGTGCAGTGGCTGCGCCAAGCTTTTGAAGTCCCACAACTGCCCCATCTGTCGGCATCCAGTTGACCGGCTTTTGGAAATTAGGGTGGATAATGGATCTGGTATGAAGTTCTGGCCTTGTTTTGTGGGTTATGGCATCGGTGGGTGGTTATAG 1191 0.4912 MSQVTTHKFTTKAGSSSFEPSFYRTRVMTEHNPIYLSRTPSAVSLCSQSSNTGVGQHSRRSCKMGNTASSGGGGGRSHWRRRHRLIQPPQLQITGSDYLSAASASRSSQFQNSVTPGMTENLGDGQLPCGPISPPMAPFVEHQKTVTIRNSVNIKKETLRFEPDQDCPGSFLVAFTFDATAPGSITVMFYAKETIEGKLEAVKESMLKQISMPFEQGLCQRFVQPPGTGIDFSMLEDKGLTKDGDAEIYPLVVKAEALPLDPHETGGNPSFQITLASFEKREKGDYKVQVMKQILWVNGKRYELQEIYGIGNAGDGDFDDLESGGECVICLSEPRDVTVLPCRHMCMCSGCAKLLKSHNCPICRHPVDRLLEIRVDNGSGMKFWPCFVGYGIGGWL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3699 396 ProSiteProfiles Zinc finger RING-type profile. 327 364 IPR001841 -
Bisa02g3699 396 MobiDBLite consensus disorder prediction 47 73 - -
Bisa02g3699 396 PANTHER MAHOGUNIN 102 376 IPR045194 GO:0061630
Bisa02g3699 396 MobiDBLite consensus disorder prediction 47 79 - -
Bisa02g3699 396 FunFam probable E3 ubiquitin-protein ligase LOG2 311 374 - -
Bisa02g3699 396 MobiDBLite consensus disorder prediction 109 133 - -
Bisa02g3699 396 Pfam Zinc finger, C3HC4 type (RING finger) 325 369 - -
Bisa02g3699 396 SUPERFAMILY RING/U-box 326 370 - -
Bisa02g3699 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 314 374 IPR013083 -
Bisa02g3699 396 SMART ring_2 327 363 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3699 Bisa-ChrBisa02 89947659 89958111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3699 138 346 C3H Transcription Factor Family AT3G09770 60.092 2.25e-79 246