Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3697 ATGAGTACTGAGGAAAAGGAAAAGCCCATGAGTGAAGGACATGATGCCGCTTCATGCCAAACAACGGTTTCTCTTCCTCTTCAGAAGGTTGATGATCCAATGGGGATAACTGAAGAATCCACACATGCTCGTCGTTGGAAACGACAGAATCTTTTACTGGAAATACCCTCAAGAACACCATCAGAAGAGTCTTCATCTCAGGATTTTGTAGCAGTGAGGATGCCTCAGACGCCAAGTCCCTCTCCAACTCCCAAGAGAGTGAATTTTCTTGTGACTCCTCCGTCCGTTGATGCCCCTCTTAATAAGTCGCCGGGGCCTTCAGCATCAAAAGCAAGACCATCCATAAGAAATCTCTTACCAAAATTGAGCTTCAGATCTCGGACACCATCAGATTTTGAAAAGGCTCCTATTGCAGCAGCTCCAGAAAGCTCATCTTCAGGCCCTCAAGAAAAGCCTTCAATCTCAAGAACATTGTCCTTTACTAAGATATTCACTCCTAGGATTAAGAGGACCTCATCATTGCCAGTAAATGAATTTGTGCATTCAAATTCAGAATCTGCTCATGTTGGAACTATTGGTGCTTCTCTACAGAGAAGTGAGGCACAGAGGAAGATAGCTCGCTCACTTTCAGTGCCCGTCAACAATAAAGAAAAAACCTTGAGGAGAATGGATTCATTTTTTCGCATTATTCCGTCCACCCCTCAAGTGAAGGATGGAATTGAACTGTCAACAGCATCCCCTATAAAGGATTCTGAAACCGATATTGCTGATGGTGAAGATATAGCTGAAGAAGAGGCTGTGTGCAGAATTTGTCTGGTGGATCTATGCGAGGGAGGCGAAACTTTCAAGCTGGAATGCAGCTGCAAAGGTGAACTTGCTCTGGCACACCAAGAATGCGCCATTAAGTGGTTTAGCATCAAGGGAAACAAGACCTGTGATGTGTGCAAGGAGGAGGTTCGAAATCTTCCAGTCACTCTCTTACGAATCCAAAGTGTTCGAACTCGGAACACTGGAGCAAGTAGGTCTCAGGAGGAAGATGTAAACGGATACAGGGTTTGGCAGGAAGTGCCAGTTCTGGTCATTGTCAGCATGCTTGCCTATTTCTGTTTTCTTGAGCAGCTGCTGGTGGGGAAAATGGGTACTGGAGCAATTGCCATATCTCTTCCATTTTCATGTGTACTGGGTCTTCTCTCTTCCATGACATCATCAACAATGGTGAAGAGCAGGTTCATCTGGATTTATGCTTCTATGCAGTTTGCTCTGGTGGTTCTCTTTGCTCATGTATTTTACTCCGTGGTAATATCCAAAGATGTTAATGTGCAAGCGATTCTGTCAATCCTTCTTGCAACTTTTGCTGGGTTTGGTGTGGTTATGAGTGGGAGTTCCATTCTTGTGGAGTTCTTCAGATGGAGAAGAGGACAGGCTTCATCGGAGCAAAATCACACTCCTCCGGTGGTGGCACTGCCTGTAAATCCGCCGCGGCCGGTCCCTTCCTTCGACACCCAAACCATGCAGCAAAATCAACAAAACTCGAGCTAG 1539 0.4555 MSTEEKEKPMSEGHDAASCQTTVSLPLQKVDDPMGITEESTHARRWKRQNLLLEIPSRTPSEESSSQDFVAVRMPQTPSPSPTPKRVNFLVTPPSVDAPLNKSPGPSASKARPSIRNLLPKLSFRSRTPSDFEKAPIAAAPESSSSGPQEKPSISRTLSFTKIFTPRIKRTSSLPVNEFVHSNSESAHVGTIGASLQRSEAQRKIARSLSVPVNNKEKTLRRMDSFFRIIPSTPQVKDGIELSTASPIKDSETDIADGEDIAEEEAVCRICLVDLCEGGETFKLECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQSVRTRNTGASRSQEEDVNGYRVWQEVPVLVIVSMLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASMQFALVVLFAHVFYSVVISKDVNVQAILSILLATFAGFGVVMSGSSILVEFFRWRRGQASSEQNHTPPVVALPVNPPRPVPSFDTQTMQQNQQNSS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3697 512 ProSiteProfiles Zinc finger RING-CH-type profile. 260 322 IPR011016 GO:0008270
Bisa02g3697 512 SMART ringv_2 267 316 IPR011016 GO:0008270
Bisa02g3697 512 MobiDBLite consensus disorder prediction 54 76 - -
Bisa02g3697 512 MobiDBLite consensus disorder prediction 142 158 - -
Bisa02g3697 512 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 323 IPR013083 -
Bisa02g3697 512 MobiDBLite consensus disorder prediction 497 512 - -
Bisa02g3697 512 Pfam RING-variant domain 268 315 IPR011016 GO:0008270
Bisa02g3697 512 MobiDBLite consensus disorder prediction 478 512 - -
Bisa02g3697 512 SUPERFAMILY RING/U-box 264 319 - -
Bisa02g3697 512 MobiDBLite consensus disorder prediction 35 51 - -
Bisa02g3697 512 CDD RING_CH-C4HC3_MARCH 268 316 - -
Bisa02g3697 512 PANTHER OS02G0165000 PROTEIN 4 481 - -
Bisa02g3697 512 MobiDBLite consensus disorder prediction 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3697 Bisa-ChrBisa02 89924965 89928555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3697 209 322 C3H Transcription Factor Family AT2G37950 33.043 9.87e-14 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1255 12 21513279 21517514 Bisa02g3697 02 89924965 89928555 CCT