Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3676 ATGAAGGAGGCCGAAAGGAGCTTGGATCCACAACTATGGCACGCATGCGCCGGAGGAATGGTTCAGATGCCGTCTCTGAACTCCAAAGTTTTCTACTTTCCTCAAGGGCACGCCGAGCACGCGCAGGCCAACGTCGATTTCTCAGCCTCCCTGAGAATCCCGCCGCTCATTCTGTGCCGCGTGGCCGCCGTGAAATTCCTCGCCGACCCAGAGACCGACGAAGTCTTCGCCAAGATCAAGCTGATTCCTTTAAGAAACTCCGAGCTCGACTACGACGATGGCGACGGCGACGACGGGAATACACACGGGTCTGAGAATTCGGAGAAGCCCGCTTCTTTTGCCAAGACCTTAACCCAATCCGACGCCAACAATGGCGGGGGCTTCTCTGTTCCGCGATACTGCGCGGAGACTATATTCCCGCGGCTCGATTACACGGCGGAGCCGCCGGTTCAGACGGTGATAGCCAAGGACGTGCATGGCGAGATTTGGAAATTCAGGCATATTTACAGAGGGACGCCTCGCCGTCACTTGCTGACGACAGGTTGGAGCACTTTCGTGAACCAGAAGAAACTCGTTGCTGGGGACTCTGTTGTGTTCCTGAGAACCGAGAATGGGGATCTCTGCGTCGGGATTCGCCGGGCGAAGCGCGGGATCGGCGCCGGATCAGAGGGCTTATCGGGATGGAGCTCCGGTCCAACCAACTGCGTGGGGGCTTATGGGGCTTTCAGTGTTTTCCTAAGAGAGGAGAACAACAAGCTACTGCGAAGTAATTCAAACTCTAATTGTGGTAGTAATAATCTGAGTGGCAGAGGAAGAGTGAGGCCTGAATCTGTCATGGAAGCTGTGTCTCTTGCTGCGAGTGGTCAGGCATTTGAGGTTGTTTATTACCCTCGGGGGAGTACTCCTGAGTTCTGTGTGAAGGCGAGGAGTGTTAAATCCGCCATGAGAATCCAATGGTGTTCTGGAATGAGGTTCAAGATGGCCTTTGAGACAGAGGATTCTTCCAGGATTAGCTGGTTCATGGGCACTATTGCTTCTGTTCAAGTCGTTGATCCTATTCGCTGGCCCAATTCTCCTTGGCGACTTCTTCAGGTTACTTGGGATGAGCCAGATTTGTTACAGAATGTGAAGCGGGTTAGCCCTTGGTTGGTTGAATTGGTATCAAACAGGCCGGTCATCCATCTGACGCCCTTTTCTCCCCCTCGGAAGAAGCTCCGGCTGCCTCAACACCCGGACTTCCCCCTGGACGGTCATTTTATGCTACCAACCTTTCCCAGCGGCAACCCCCTCGGGCCAAGCAGCCCCTTGTGTTGTCTATCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGAATATCTCTTGCAGATCTCCACCTTAACCATAAACTGCAGTTGGGGCTGCTCTCGAATAACATCCAGCAGCTTGATGTGCGTCCCGGGATTTCTAATGGCAATATAATGATGAGCCACGATAAGAAAAATGAGAGCTTGTCGTGCTTGCTTACCATGGGAAGTTCTAAAAAGAGTTTGGAGAAATCTGATAATGTGAAAAGACACCAGTTTCTGCTCTTTGGTCAACCAATACTGACCGAGGAGCAACAAATTTCTCGAAGCAGTTCACCAGATGACGATAAGGATAAAGCCAAGTGCTTCTTTGGTGATTCCCAATCTATGGTTTCGCAGCAAATTTCGCCAGGACTGTCTTCTACTGCTGAGTTCTCTTGGCAACTTGGCTTGGATACGGGTCATTGCAAGGTTTTCATGGAGTCAGAAGATGTGGGACGGACTCTAGACCTATCGCGTCTCGGTTCTTATGAAGAGCTGTATCGGAGGCTCGCCAACATGTTCGGACTCGAACATTCTGAGATGTTGAGCCATGTGCTCTACCGTGATGCATCAGGTGCTGTTAAACAAACCGGAGAAGAACCCTTCAGTGACTTCATGAAAACAGCAAAAAGATTGACAATTCTGACTGATTCTGGCAGCAAAGACATAAGAAGGGCATGGATGACGGGAGCTCGAAACGGAGAACACGGATTGGATGCATCAAACAAGACAGGTTTTCTGAGCATATTTGCATAG 2097 0.5107 MKEAERSLDPQLWHACAGGMVQMPSLNSKVFYFPQGHAEHAQANVDFSASLRIPPLILCRVAAVKFLADPETDEVFAKIKLIPLRNSELDYDDGDGDDGNTHGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRTENGDLCVGIRRAKRGIGAGSEGLSGWSSGPTNCVGAYGAFSVFLREENNKLLRSNSNSNCGSNNLSGRGRVRPESVMEAVSLAASGQAFEVVYYPRGSTPEFCVKARSVKSAMRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIHLTPFSPPRKKLRLPQHPDFPLDGHFMLPTFPSGNPLGPSSPLCCLSDNAPAGIQGARHAQFGISLADLHLNHKLQLGLLSNNIQQLDVRPGISNGNIMMSHDKKNESLSCLLTMGSSKKSLEKSDNVKRHQFLLFGQPILTEEQQISRSSSPDDDKDKAKCFFGDSQSMVSQQISPGLSSTAEFSWQLGLDTGHCKVFMESEDVGRTLDLSRLGSYEELYRRLANMFGLEHSEMLSHVLYRDASGAVKQTGEEPFSDFMKTAKRLTILTDSGSKDIRRAWMTGARNGEHGLDASNKTGFLSIFA 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3676 698 SMART B3_2 113 215 IPR003340 GO:0003677
Bisa02g3676 698 Gene3D - 585 670 - -
Bisa02g3676 698 Pfam B3 DNA binding domain 113 214 IPR003340 GO:0003677
Bisa02g3676 698 ProSiteProfiles B3 DNA-binding domain profile. 113 215 IPR003340 GO:0003677
Bisa02g3676 698 SUPERFAMILY DNA-binding pseudobarrel domain 106 217 IPR015300 -
Bisa02g3676 698 CDD B3_DNA 112 213 IPR003340 GO:0003677
Bisa02g3676 698 Gene3D - 111 215 IPR015300 -
Bisa02g3676 698 ProSiteProfiles PB1 domain profile. 586 666 IPR000270 GO:0005515
Bisa02g3676 698 Pfam Auxin response factor 281 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa02g3676 698 MobiDBLite consensus disorder prediction 90 104 - -
Bisa02g3676 698 Gene3D - 319 391 - -
Bisa02g3676 698 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 665 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa02g3676 698 MobiDBLite consensus disorder prediction 90 110 - -
Bisa02g3676 698 FunFam Auxin response factor 111 215 - -
Bisa02g3676 698 FunFam Auxin response factor 319 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3676 Bisa-ChrBisa02 89668535 89671663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3676 4 670 B3 DNA Binding Superfamily AT4G30080 61.708 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa02g3676 B3 2.2e-21 CL0405