Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3674 ATGAGGCGCGGAAAACAAAGGAAGCTGGTCTTCAGCATCGTTATTAAAGCCAATAGTTCCCGAGGAAGAAGGCCCATAGAATCTAGGGCCGTTCTTTTTCCCGGGAAAATTCTGGGACTCTATGTTTGGTTGGTGAGAAACTTTCAGGACAGAGACTTCCAGTATCCGAGTTCTGAAAGGGGTTTTAGTGGGTCCAACTTGATTGTGAGTCAGGATATTGTTTTAGCCATGTTATCTTGGTCTCCTCTAATGTATCACGACCTTTTCATATTTGTAAAAGAGAACAGTATTCTTGTTGCTTCGTCGAATCTGTCGCTTTCTTTGTTTAACTTTTTGGGATTAGGAATTTTGTGGATGGATCCTAATCTAAAATTTTTTGTGCTGCTGATGCTTGTTGGACTAGTGAATGCGTCTTTCACAAAAAATGATTTTGGACAATGCGAAAGAGCTGTTAGAAATTGGGCATACTCTTCACTTGATAAAGAAATCAGAGAGGATAAACATACACTGAGGGATTTGCTATTTTTCCTCCATGTCCCAAGAACAGGAGGGCGCACATATTTTCACTGTTTCTTGAAGAAGTTGTATCCCAGCTCTCTTGAATGCCCCCGTTCTTATGATAAGCTGCACTTTGATCCAAGCAAACCTAAGTGCCGGCTTTTAGTTACACATGATGACTTTAGCATCACTTCGAAACTGCCGAGGGACAGAACTTCTGTGGTTACCATACTCAGAGATCCAGTTAGCCGTGTCTTTAGTACTTATGAATTTTCAATAGAGGTTGCAGCTAGATTTTTGGTGCATCCAAACTTGACATCTGCAACTCGGATGTCTGGACGGTTGCGCTCTAAGACTAAAGGAGTAAGCACCCTTGATATCTGGCCCTGGAAATATCTGGTTCCATGGATGAGGGAAGACCTATTTGCTAGGAGAAATATGAGGCAAAGTAGGGGACTACCTATCACTGGGAGCAATGATTCCTATGACATGGAAGATTTTGCAATGCCATTTCATGAATTCATCAATCATCCAGTGGCTGAGCATATTGTACATAATGGAGCCACATTCCAGGTTGCAGGTTTGACAAACAATTCTTGTCTGGCAGAATCACATGAAGTGCGCTATTGCGTACAGAAGTATAAGATTCTTGGAGAATATGTGCTACAAGTTGCAAAGAAGAGGTTGGATGATATGTTATTTGTTGGTCTTACTGAGGAGCACAAAGAATCTGCAACAATGTTTGGAAATGTGGTTGGTGCTCAGGTGATATCACAGCTGAGAGCACCAAATACTAGCATGGATAATACAGCATTGATCGATACCTTTATTACAGAACATAGTTCACTTTTGAATTCCGAGCCTGATAACCGTGAACATCAGAATGGCACCTTAGACAGCAGCGCAAGTGAGATGGCTTCAAGTGAAGTGACAGAATCAGATATGACTGTGGAAGAGCTCATGGAATCTTATGAAGTCTGTATTTCTAGTTTACGGAAGTCTCAGTCTCAACGACGCACCTCTTCTTTGAAGAGAATTTCTCCAGTGAACTTCTCAAAGGAGGCACGCCTTCAGATTTCTGAAGCAGTTCTTCAGCAGATACAATCTCTTAATGACCTTGACTTAGAGCTCTATGAATATGCAAGAGAACTTTTTTCCAAGCAACACATAAATACGTTGCAGAAATTTACTGAGGTAGTGTGCACTGCAAGACCTGATATGCCTGATCTAATTTACTGACAGATGGGAAAACGTGTCAAGCATAACGAACTGGAAGGTCCTTCCGTCAGTAATCACTTTGGTCTTCCTCCTTTCGTTCTTTCTGATTGTTTGAGAGAAATAGACTTGTCAGAATTCAGTACCATTCTCAGCCATGGCCGTCTCTGCTCGCCACGCAATGCGCTTCTCTACTCCCTTTTAGTCACTGAAGCTTCCGTTTCAGAGGATATCAATAACATGAAGGATTCTTGGTTTTTCGACAAGAATTTTAATGGTCTATCAGATGAAATATTTGATGATGTTATCAAATTTTTTGATTTCCCGCTGGAAGATGTGGAACCTGGTGCTGTGGAAGAAGATTGGGATGCTCAATTCAAACGCATTGAAGAGCCAGCTTTTGATGTTTTCTCGGTAACATCTTCTGTGCTGTGTGATAAAACACAAAAAGGCAAACCAATACTTGGAAGGAATGTCCCTGCTTCTTGTGCTGAGATTTCCCCAATAGAACAAGTGCAGGCAACTGCTAAACCTTCATATACCAAAAGCATTCCCAGCCAGAATGGCTCTTCGAATGGCAAAGATTTGCACCAATTCCGAATCTACAGTCCAGTCTCTGTTTTTGAAAGCAGTAGTACTTCATCAGGTGAGAATGCCTTTGATCAACCAGTCATCCCAAAGCGTGCCCGCGGAAAACGTCGGCGTCTCTCGAGCTTCAACCCTCTGTTTTCGATTCCTTTTATCTCACCTTCACCAGATTTGCAAAAACCTCAGAGGATCGCTGCCTCTGAATCAGATTTTGAAGCACACCTTACTGGGAAATCATCATATGGTTCCAAAAGGAAGCCGAGGAAAAAGGATCTCTCCATGATTTCAGGTGATGGTGAGATGACGAGATCCTCATCACAGGAGTCAATCGTTCCCAGAAAATGCATGCATTGTCAGGTGACAAAGACCCCCCAGTGGAGGGAGGGACCTATGGGCCCAAAGACCCTTTGCAATGCGTGTGGGGTTCGATACAGGTCTGGCCGCCTCTTCCCCGAATACCGGCCTGCAGCCAGTCCAACATTTGTAGCATCATTGCACTCTAACTGTCACAAGAAGGTCTTAGAGATGAGAAACCAACCTATCCGTGAAGCTGACAAGGGTTCTATGTTGCCTTTGTCATCAAACCTTTCTGGAAATTCACTAGGATAA 2910 0.4285 MRRGKQRKLVFSIVIKANSSRGRRPIESRAVLFPGKILGLYVWLVRNFQDRDFQYPSSERGFSGSNLIVSQDIVLAMLSWSPLMYHDLFIFVKENSILVASSNLSLSLFNFLGLGILWMDPNLKFFVLLMLVGLVNASFTKNDFGQCERAVRNWAYSSLDKEIREDKHTLRDLLFFLHVPRTGGRTYFHCFLKKLYPSSLECPRSYDKLHFDPSKPKCRLLVTHDDFSITSKLPRDRTSVVTILRDPVSRVFSTYEFSIEVAARFLVHPNLTSATRMSGRLRSKTKGVSTLDIWPWKYLVPWMREDLFARRNMRQSRGLPITGSNDSYDMEDFAMPFHEFINHPVAEHIVHNGATFQVAGLTNNSCLAESHEVRYCVQKYKILGEYVLQVAKKRLDDMLFVGLTEEHKESATMFGNVVGAQVISQLRAPNTSMDNTALIDTFITEHSSLLNSEPDNREHQNGTLDSSASEMASSEVTESDMTVEELMESYEVCISSLRKSQSQRRTSSLKRISPVNFSKEARLQISEAVLQQIQSLNDLDLELYEYARELFSKQHINTLQKFTEVVCTARPDMPDLIYXQMGKRVKHNELEGPSVSNHFGLPPFVLSDCLREIDLSEFSTILSHGRLCSPRNALLYSLLVTEASVSEDINNMKDSWFFDKNFNGLSDEIFDDVIKFFDFPLEDVEPGAVEEDWDAQFKRIEEPAFDVFSVTSSVLCDKTQKGKPILGRNVPASCAEISPIEQVQATAKPSYTKSIPSQNGSSNGKDLHQFRIYSPVSVFESSSTSSGENAFDQPVIPKRARGKRRRLSSFNPLFSIPFISPSPDLQKPQRIAASESDFEAHLTGKSSYGSKRKPRKKDLSMISGDGEMTRSSSQESIVPRKCMHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVASLHSNCHKKVLEMRNQPIREADKGSMLPLSSNLSGNSLG 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3674 969 MobiDBLite consensus disorder prediction 843 875 - -
Bisa02g3674 969 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 876 937 - -
Bisa02g3674 969 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 125 570 IPR010635 GO:0008146|GO:0016020
Bisa02g3674 969 Pfam GATA zinc finger 882 915 IPR000679 GO:0006355|GO:0043565
Bisa02g3674 969 SMART GATA_3 876 926 IPR000679 GO:0006355|GO:0043565
Bisa02g3674 969 Gene3D - 873 953 IPR013088 GO:0006355|GO:0008270
Bisa02g3674 969 CDD ZnF_GATA 881 928 IPR000679 GO:0006355|GO:0043565
Bisa02g3674 969 MobiDBLite consensus disorder prediction 449 480 - -
Bisa02g3674 969 MobiDBLite consensus disorder prediction 945 969 - -
Bisa02g3674 969 ProSiteProfiles GATA-type zinc finger domain profile. 880 912 IPR000679 GO:0006355|GO:0043565
Bisa02g3674 969 Gene3D - 169 458 IPR027417 -
Bisa02g3674 969 MobiDBLite consensus disorder prediction 748 767 - -
Bisa02g3674 969 FunFam GATA transcription factor 871 956 - -
Bisa02g3674 969 ProSitePatterns GATA-type zinc finger domain. 882 907 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3674 Bisa-ChrBisa02 89641810 89654377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3674 659 946 C2C2-Gata Transcription Factor Family AT1G08010 36.149 2.90e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa02g3674 GATA 9.3e-16 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g3674 02 89641810 89654377 Bisa02g3674 02 89641810 89654377 ECH