Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3666 ATGAAAGCGAAACCTGAGATTCTAATATGGAAACCCAATAACAATTTATCAGTTGCTTCAGTGTATGGGTTGGAACATATGAAGCCCCAACTCAAAGTTGTTCTCTCTTTTGTAATTTGCTTGCTCTTGATTCGACACTCGCTATGTGGTCGACCTTCTGATACTTCTTCTGGCCATGGCAAATGGACATGTAGATGTTCTTTCAGAGAGAACCCGAACTCTCTTGCTGATTGTTCTACATCATGCGATTGTCATCCAGATACTGAAGAGAGTGGATCCATATGGACATGCGTATGTGATCCCAATGGGTTTCCTAAAGTGGCAGCAGATGGCCATAGTCCTAATTGCTTTAGAGGCTGCAACTGCACCTGGGGAACTCCTCTCAGCACGTCACAAGGTCCAAAGAAACACATCTCCAGCAAGATTATAGTAATCATCTTATTAGTTACATGCACAACTATTGCATTTCTGGCCTCATTCGTATGCTATGTCTTCCAGAGGGACCGATGTCCTATTCAACTACCTATATTCTCATTAGATAAGGAAACAAGTTGCAATAGTACCCCCAACTTAATTTGTAATAGGACTATTTTAGTGCCAGAAACGAAAGTTTCTCCCGTTAATCATTTTACAGGATGCTTTCGGAAAGCTTCTTCCTTGTTTGGGAGCAGAACTGAAGCTTTTCAAGGCAAAATTATTCAATTTTCATTTGCCGAACTGGAAAATGCAACTGAAAATTTTTCAGCTTCAAATCTTGTTGGACTAGGTGGAAGTAGCTATGTATATCGTGGTCAACTAAAAGATGGTAGCAATGTGGCAATCAAGCGACTAAAATCTCAAGGAGGGCCTGAAGCCGACTCCGTATTTTTGACAGAGATTGAACTATTATCTAGACTCCACCATTGCCATCTTGTGCCTTTGCTTGGATACTGCTTAGAACTAAAAGGGAAACAAGTTGAGAGGCTACTAGTATTTGAATACATGACTAATGGCAATTTGAGGGATTGTTTGGATGGAGTTTCTGGAGAAAATATGAATTGGGCTACTCGTGTTACAGTTGCCATAGGAGCTGCTCGAGGCTTGGAATATCTACATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACTAACATTCTTCTGGATAAAAATTGGCAAGCAAAAATAACTGACCTTGGTTTGGCTAAGAACTTGAGAGTTGATGACCTACCCAGCTCTTCCGATTCTCCAGAAAGAATGCAGGGAACGTTTGGCTATTTTGCACCTGAGTATGCAATTTCTGGAAGGGCCTCTCCTAAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATGAGTGGTCGGCAACCCATCTATAATTCCACAGACAAAGAAGAAAGCCTTGTCATATGGGCTACTCCTCTCTTACAAGATAGTGGGCGAGTAATAACGGAGTTGATTGATCCACAATTGAAGGGAAACTCCCCTGAAGAAGAGGTGCAGATAATGGCATATTTAGCCAAGGAATGTTTGCTGTTGGATCCTGATACCAGGCCAACCATGAGTGAAGTTGTTCAAATTCTTTCAACTATATCGCCAGACAAATCTAGGAGGAGAAGAAAAATTCCAATGAGCCTTTTTAAGGAATCTCAGGAAGCAGAAAGGAAAAGGCAAGCTCCTTCTAGTGAAAGTTCAGATCAAAATTCATTGACATTAGATGTAAACCACAATCTGTCAGTTGAGAACAATGAAGAAGCAGATACAGTTTCAACGGAGTATATGGAGAGTTTTATCCTCTCGACATCCAAAGAGGGTTGGCATGCATATGATGATGAAATCGTAGACCTAACCGAGCCTCGGTTTGAATCATTTTGCCTGACAAACAGCAATTCCCCTTGA 1893 0.4136 MKAKPEILIWKPNNNLSVASVYGLEHMKPQLKVVLSFVICLLLIRHSLCGRPSDTSSGHGKWTCRCSFRENPNSLADCSTSCDCHPDTEESGSIWTCVCDPNGFPKVAADGHSPNCFRGCNCTWGTPLSTSQGPKKHISSKIIVIILLVTCTTIAFLASFVCYVFQRDRCPIQLPIFSLDKETSCNSTPNLICNRTILVPETKVSPVNHFTGCFRKASSLFGSRTEAFQGKIIQFSFAELENATENFSASNLVGLGGSSYVYRGQLKDGSNVAIKRLKSQGGPEADSVFLTEIELLSRLHHCHLVPLLGYCLELKGKQVERLLVFEYMTNGNLRDCLDGVSGENMNWATRVTVAIGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGLAKNLRVDDLPSSSDSPERMQGTFGYFAPEYAISGRASPKSDVFSFGVVLLELMSGRQPIYNSTDKEESLVIWATPLLQDSGRVITELIDPQLKGNSPEEEVQIMAYLAKECLLLDPDTRPTMSEVVQILSTISPDKSRRRRKIPMSLFKESQEAERKRQAPSSESSDQNSLTLDVNHNLSVENNEEADTVSTEYMESFILSTSKEGWHAYDDEIVDLTEPRFESFCLTNSNSP 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3666 630 ProSitePatterns Protein kinases ATP-binding region signature. 253 275 IPR017441 GO:0005524
Bisa02g3666 630 MobiDBLite consensus disorder prediction 560 585 - -
Bisa02g3666 630 MobiDBLite consensus disorder prediction 533 559 - -
Bisa02g3666 630 SMART serkin_6 247 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3666 630 MobiDBLite consensus disorder prediction 533 585 - -
Bisa02g3666 630 PANTHER OS01G0750732 PROTEIN 65 560 - -
Bisa02g3666 630 Pfam Protein kinase domain 250 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3666 630 Gene3D Transferase(Phosphotransferase) domain 1 328 551 - -
Bisa02g3666 630 Gene3D Phosphorylase Kinase; domain 1 221 327 - -
Bisa02g3666 630 SUPERFAMILY Protein kinase-like (PK-like) 229 526 IPR011009 -
Bisa02g3666 630 CDD STKc_IRAK 253 526 - -
Bisa02g3666 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Bisa02g3666 630 FunFam receptor-like serine/threonine-protein kinase NCRK 328 538 - -
Bisa02g3666 630 FunFam receptor-like serine/threonine-protein kinase NCRK 221 327 - -
Bisa02g3666 630 ProSiteProfiles Protein kinase domain profile. 247 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3666 Bisa-ChrBisa02 89497375 89501648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3666 30 626 Receptor kinase-like Gene Family AT2G28250 51.570 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Bisa02g3666 Pkinase 1.4e-43 CL0016