Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3663 ATGTTAGAGCAAGAGAGCGTGAACGACGTCGTTTCAGCGGGGGAAGACAAGAAGAGGAAGAAGGAGATCAAGCGCGGCGTAAACGACGTCGTTCCAATGGAGGAAGACGAGAAGAGGAGGAAGGAGATCAAGGATCCGCTGAAGTGGGAGATGGCGGCGGAGGCTATGAGGGGGAGCCACGCCGAGGAGGTGAAGAGGATGGTGAAGGAGTACCGGAGGAGGGTGGTGAGGGTGGGAGGGGAGACCCTGACGGTGGGGCAGGTGGCTGCGGTGGCGGCGGGGGCTGCGGAGGTGGAGCTGGAGAAGGGGAGGAGGGAGGCGGTGGATGCGAGCAGCGCGTGGGTGAGGGAGAGCGTGGGGAAGGGGACGGACAGTTATGGAGTGACGACGGGGTTCGGTGCGACGTCGTACAGGAGAACGAGGGAAGGGGTGGCCCTCCAATCTGAGCTCATCAGGTTTCTGAATGCTGGAATATTTGGGAATGGGACAGAAGCTTGCCACACGTTGCCGCACAACGCAACAAGAGCTGCAATGCTTGTGAGAGTCAATACCCTGCTTCAGGGCTACTCTGGCATCAGATACAACATACTTGAAGCCATTGCAAAACTACTCAACCACAGCATAACTCCATGCTTACCCTTGCGTGGTTCAATTTCAGCCTCTGGGGACTTAGTCCCATTTTCATACATAGCTGGACTTTTGACAGGAAGGCCTAATTCAAAAGCTGTGGGCCCAAGAGGCGAGTCCCTCACTGCTTCCGAAGCCTTCCATCTAGCCGGTATCAACGGAGGCTTCTTTCAGTTGCAGCCAAAGGAGGGCCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCCTCTCTAGTTCTTTTTGAGGCTAACATTTTAACCATTCTATCTGAAGTTATGTCTGCGATTTTTGCTGAAGTCATGCACGGGAAGCCGGAGTTTACAGACCATTTGACGCACAAATTGAAACACCATCCTGGGCAGATTGAAGCAGCAGCAATAATGGAACACATATTGGATGGAAGTGCTTATGTTAAAGCAGCACAAAAGTTACACGAGATTGACCCATTTCAAAAGCCTAAGCAAGACAGATATGCTCTTCGAACTTCGCCACAATGGTTAGGTCCGCAGATTGAAGTTGTCAGGTCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATCGACGTAACGAGGAACAAAGCTCTTCATGGGGGCAATTTTCAGGGTACCCCAGTTGGTGTTTCAATGGACAACACAAGATTAGCTTTGGCTGCGATAGGAAAGCTCCTCTTTGCTCAATTGTCTGAGCTGGTTAATGATTTCTACAACAATGGGTTGCCTTCAAATCTCTCTGGTGGTCGTTGTCCGAGCCTGGATTATGGATTCAAGGGTGGTGAGATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTAGCAACCCCAGTCACTAATCATGTCCAAAGTGCTGAACAGCACAACCAAGATGTGAATTCGTTAGGACTAATCTCTGCCAGGAAAACAGCTGAAGCTGTTGAGATATTGAAGCTCATGATTTCAACCTACCTGATTGCTCTTTGTCAAGCCATAGATTTGAGGCATTTGGAGGAGAACTTAAAGAACACAGTTAAGAACACAGTGAGTCAAGTGGCTAAGAAAGTCCTAACCGTGAGTGCCAATGGGGAACTTCATCCTTCAAGATTTTGTGAGAAAGATTTGCTCGAAGTGGTTGATCGTGAGCATGTTTATGGCTACATCGATGACCCATGTAATGCTACCTATCCTCTGATGGAGAAACTAAGGAAAGTGCTTGTGGAACATGCATTATTGAGTAATGATGGTTTGACAAATGCACATGCTTCCATATTTCTCAAGATCGGTGCCTTTGAGGAGGAATTGAAGAAAGTGTTGCCTAATGAAGTTGAGTCTGCAAGAAATGCCTTTGAGAAAGGGAATTCAGCAGTCCCTAACAAGATTAAGGAGTGCAGGTCTTATCCACTCTACAAGTTTCTAAGAGAAGAGTTGGGGACAGAGTTTTTGACCGGAGAGAAAAGCAAGTCCCCAGGGGAAGATTTTGAAAAGGTTTTCACTGCCTTTAACGAGGGAAAGATGATTGATCCACTGTTTGAATGCCTCAAGGATTGGAATGGTACTCCTCTTCCAATATGTTAA 2205 0.4803 MLEQESVNDVVSAGEDKKRKKEIKRGVNDVVPMEEDEKRRKEIKDPLKWEMAAEAMRGSHAEEVKRMVKEYRRRVVRVGGETLTVGQVAAVAAGAAEVELEKGRREAVDASSAWVRESVGKGTDSYGVTTGFGATSYRRTREGVALQSELIRFLNAGIFGNGTEACHTLPHNATRAAMLVRVNTLLQGYSGIRYNILEAIAKLLNHSITPCLPLRGSISASGDLVPFSYIAGLLTGRPNSKAVGPRGESLTASEAFHLAGINGGFFQLQPKEGLALVNGTGVGAGLASLVLFEANILTILSEVMSAIFAEVMHGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVVRSSTKSIEREINSVNDNPLIDVTRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQLSELVNDFYNNGLPSNLSGGRCPSLDYGFKGGEIAMASYCSELQYLATPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMISTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTVSANGELHPSRFCEKDLLEVVDREHVYGYIDDPCNATYPLMEKLRKVLVEHALLSNDGLTNAHASIFLKIGAFEEELKKVLPNEVESARNAFEKGNSAVPNKIKECRSYPLYKFLREELGTEFLTGEKSKSPGEDFEKVFTAFNEGKMIDPLFECLKDWNGTPLPIC 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3663 734 CDD PAL-HAL 105 544 IPR001106 -
Bisa02g3663 734 FunFam Phenylalanine ammonia-lyase 547 668 - -
Bisa02g3663 734 FunFam Phenylalanine ammonia-lyase 281 584 - -
Bisa02g3663 734 SUPERFAMILY L-aspartase-like 45 734 IPR008948 GO:0003824
Bisa02g3663 734 Gene3D - 547 668 IPR023144 -
Bisa02g3663 734 NCBIfam phenylalanine ammonia-lyase 45 724 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bisa02g3663 734 Pfam Aromatic amino acid lyase 83 557 IPR001106 -
Bisa02g3663 734 MobiDBLite consensus disorder prediction 1 23 - -
Bisa02g3663 734 PANTHER HISTIDINE AMMONIA-LYASE 38 734 IPR001106 -
Bisa02g3663 734 Gene3D - 36 280 IPR024083 -
Bisa02g3663 734 Gene3D Fumarase/aspartase (Central domain) 282 728 - -
Bisa02g3663 734 FunFam Phenylalanine ammonia-lyase 36 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3663 Bisa-ChrBisa02 89443118 89447275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3663 44 734 Monolignol Biosynthesis Gene Families AT2G37040 76.768 0.0 1144