Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3660 ATGATTTTTCTTTGGTTTATTGCCTTAATCTGCATGAGTTCAAGTTCTGCTGAGCAATTCTACGACGGTACAACCTGTTCTTCAGATCCTGATAGTTTCCCAGGTTCAAGGTACACTTGCAATTCCCAGGATTCATGCGAAACATTCTTGGTTTTCAGATCAAACCAACGATTTCAAACAATCTCAGACATCTCAAAGCTCTTCCATGTTGACTCTGACGAACTGCTCCAAGAAAACGACAACCTCCTTTCTTCCACTCAGCTCCTTGAACCAGGCAAAGAGGTTCTTATTCCTCTCACATGTGCCTGCTCTAGCGGCTTCTATCAAGCCAGTTTGAAATATGAAGTCCTCGAAAATACCACGTTTTCTGAGATTGCTTGTGGGGTTTTTCAAGGACTGCTCAAATCTGCCACACTCGCACAGAACAACCTTAATGACACCAAACCTGGTTCTCAGCTTACTGTTCCTCTTAGATGTGCATGTCCTGAGAATTCAAGTGGTTCTAGCAAGAAGGTGAAGTATCTTGTTACGTACCCTATAGTAGAAGGAGACGAACAAAGTCCATTGACTGAGAAATTTGGCATTTCATTGGAAGATTTCTGGGAAGCCAATCAGTTGGATTCGTTCTCAACTCTGTTTCCACAAACAACAGTTTTGATCCCATTAAAGGACGGTCCAATTAGGATTCTTGATATTACAGAACCTTCTCCAGCTCCAACTGCTGGTTTTCTTCCAACACTTCCCGTGGCAAAAACACAAAGAATCACAAGCCCGACCAACCTGTACATCGCAGGTTCTGTCATAGGATTTTTGCTGTTATTCATGGCAATGCTTGTAAGTGGTTTGTACATTAAGGCCTTAAGGAAATGGAAGAGTGAAAGCGTTCAACCTTTCACTCCAACAACCTCCATGGCCTTGTCCCCAATAAGAGGCTCTTCAACACCCTCATGTCTTTCTCCAGATCTCCTAGCAGGAATAAAGTACTGTTTGGTCAATTACAGCATGGAAGAGCTCAAGAAAGCCACAAAAGATTTCAGTGAAGACACCCAGATAAATGGTTCAGTCTATAAAGGGGTGGTCAATAATCTCGAGGTCATGATCAAGAGGATGAGACTTGAAGACACGCGCAGGGTGATTGATCTACATTCTAAGATCAACCACATCAATATTGTGAACTTACTTGGAGTTTGCTATGGAGAGAGTGATTTGTCATGGTCTTATTTAGTCTTTGAATGGCCTAAAAAGGGTTGCTTAAGGGACTGTTTAAGGGACTGTTCGTTTGATGGATCTAATCCCCTTCACTGGAGCAGAAGGACACAAATAGCTTTTGATATAGCCACAGGTCTTCACTATTTACACTGCTGTGCTTTTCCGTCTTATGCTCATTTGAATGTTAGTACGAGAAATATATTCATAACAGCAGAGTATAGGGGGAAACTAGCAGAAACTGTTGCACCAGAGAGCCCTGTGAATGGATCAGTTTCAGAGAAAGTGGATGTGTTTGCATTTGGGGTTGTGTTGCTTGAACTGATATCTGCAAGAGAGAATACTGATGGGAGATTAGTGAGAGCTTCCATTGGGTTTGTGGGAGGAGGAGGAGGGGATGAAGGAGGTTGTTTTGAAGGATTGAGGAGTTTCATGGATCCAAATCTGAAGGATTATCCTCTTGCAGAGGCTCTGTGTTTGGCTGTCTTGGCTAAGGCTTGTGTTGCAGATGATCCCTTGCATAGGCCAACCATGGATGATATCATCAAAGTCCTTACAAAAATGGTTTGGTCTCATCAAGCAGAAACATACTGA 1800 0.4261 MIFLWFIALICMSSSSAEQFYDGTTCSSDPDSFPGSRYTCNSQDSCETFLVFRSNQRFQTISDISKLFHVDSDELLQENDNLLSSTQLLEPGKEVLIPLTCACSSGFYQASLKYEVLENTTFSEIACGVFQGLLKSATLAQNNLNDTKPGSQLTVPLRCACPENSSGSSKKVKYLVTYPIVEGDEQSPLTEKFGISLEDFWEANQLDSFSTLFPQTTVLIPLKDGPIRILDITEPSPAPTAGFLPTLPVAKTQRITSPTNLYIAGSVIGFLLLFMAMLVSGLYIKALRKWKSESVQPFTPTTSMALSPIRGSSTPSCLSPDLLAGIKYCLVNYSMEELKKATKDFSEDTQINGSVYKGVVNNLEVMIKRMRLEDTRRVIDLHSKINHINIVNLLGVCYGESDLSWSYLVFEWPKKGCLRDCLRDCSFDGSNPLHWSRRTQIAFDIATGLHYLHCCAFPSYAHLNVSTRNIFITAEYRGKLAETVAPESPVNGSVSEKVDVFAFGVVLLELISARENTDGRLVRASIGFVGGGGGDEGGCFEGLRSFMDPNLKDYPLAEALCLAVLAKACVADDPLHRPTMDDIIKVLTKMVWSHQAETY 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3660 599 ProSiteProfiles LysM domain profile. 48 97 IPR018392 -
Bisa02g3660 599 SUPERFAMILY Protein kinase-like (PK-like) 335 592 IPR011009 -
Bisa02g3660 599 Gene3D Transferase(Phosphotransferase) domain 1 483 598 - -
Bisa02g3660 599 Gene3D Transferase(Phosphotransferase) domain 1 337 482 - -
Bisa02g3660 599 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 595 - -
Bisa02g3660 599 Pfam Protein tyrosine and serine/threonine kinase 353 481 IPR001245 GO:0004672|GO:0006468
Bisa02g3660 599 Pfam LysM domain 191 221 IPR018392 -
Bisa02g3660 599 Pfam LysM domain 60 98 IPR018392 -
Bisa02g3660 599 ProSiteProfiles Protein kinase domain profile. 272 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g3660 599 ProSiteProfiles LysM domain profile. 176 220 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3660 Bisa-ChrBisa02 89324425 89326224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3660 3 595 Receptor kinase-like Gene Family AT2G23770 31.201 3.14e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa02g3660 PK_Tyr_Ser-Thr 3.3e-13 CL0016