Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3658 ATGAGCAACAAAAGGCCTGAACCGCATGTAGCGCAACACATTCGGCGTGACAAGTTGAGAATCCAGAATAGCCCCCAGCATTTAGAAGATTTTCCTAACAACCTCGAACAATTATCTTTACACCCAGGGTTCAGTACGGATCTTCTTCAAGTTAGAAGTGTTAGAAACGCCAACATGCTTTACGAACCGCCTTTTTACTCATCGGAAACTGTCAATCCTTCAACGGCTTCGAATCCTCTATCTGCTATGATGCCTCAGCTCGCCTCTATATTTCCCCATTCATCGGACCCAGCGTCGTCCAGCATTCATTCATCCCCCGAACAACAATGCGAAGTGCGTGACTTAGGCAATTGGAGGAACAGTGGGTCACACCAAGGCTGTGATTGGATGTTAAATTATGCATCTAGTTCTGCGGCTAACGAAAGCATTCCTAATCCTCAATCTATTTTTGTCTCGGAAATCAATAACGAACTCACAGGTGTACAGATACAGTCGTCTCCTCTGAACAATCCGTCAAGTGAAACGGCGACTCGAGAAAGCCAAGGGCAATTAGGGGATATAATCAGGTCAGCATCTATCAGTGGGCAAGCGTCAGAAATGTCTTCACTGATGCAGCAAACTGGCTATGGTATTTGGGTGGAAAACGGCAATCAACTTGTATATTTTCCTAACTATGGAAACCAACTAACAAATCAGTCGCGTTTCGGAAATCCTAGTTCTGGGACATATCCAATGGTCGAGAATTCCCCCCGTTGTAAGAAGAGTGATGAAAGCTCTGGTCCTCTCGGGAGCGATTCCAATAATCAGGCCTTATCCTTATCACTTTCATCTCACGCCCAGTCTGCGCCTTGTGGATCGGATGACCCTCAATCGCGATATGTCGTTTCTAAGGATCTTCAATACTCGAAATCTGTGAGATCTATTTCAAGTCCCTCTTTCGTTTCTGGAGATTCCAGCAAATCGCTTCAAAACATGGTGGTTGGAGTACCTTCTTCAAGCGTTGGTCCTCGCAATGTGGGGCCCCTTGGTCCTTTCACAGGGTATGCTATCATATTAAAGAGCTCGAATTTCTTGGAACCGGCCCAACAGTTGTTGGATGAGATCTGTAGACAATCTAGTCAAAATATTATGAAACAATTTGATTTTTCTGGGGGGGTGTCTGGAGAAGTTGGTGCTCCTACTTCTGCTAACGCTGTTAGAGCAACAAAAGAAAGTGGGGTCGGGGCAAAGAAAGGTAATTCAGTTGCTTCGTCCTCCATGTTTCCCAGCTCAAATGGAAATGAAAATAGTGGAGATGGAAGAGCCGGGAGTAGTGCTCATCTTTCTTCTCGGCCAGAGTATCAACAAAGAATGGCAAAGTTCCTGTACATGGAAGAGGAGGTTATCAGAAGATACAAGCAACATCATCAGCAAATGCAAATGGTTGTTTCATCCTTTGAGTCTGTGGCGGGTCTCAGTTCTTCTACTCCTTACATCTCCAAGGCTCTCAAGTCAGTATCAAGACACTTCAGATACCTAGAAAATGCTATCTCAGATCAGCTTAAGCGTATAAGAGAAGTTTTGGGAGAGGAATTGGCAGGACCCACTAGCGGGAGTGGCAAACTTGATAGCAATATGGCTAGACTAAGGTTCTTGGACCAAAGCTTTCAAAAAAACAAATTCATTGTGGGTAGTGCAGGCTTTCTTGAACACGAACAGCACAGCTGGAGGCCCCAGCAGAAAGGCTTACCAGAACGTGCCGTGGCAGTTCTTAGAGCTTGGTTATTTGAGCATTTTCTTCATCCGTACCCCACGGACGCTGATAAACACATGTTAGCTGCTCGAACAGGACTGTCTCGGAACCAGGTATCAAATTGGTTCATAAATGCCCGAGTACGTGTTTGGAAGCCAATGGTTGAAGAAATACACATGCTTGAAAGGAAAGGGTTGGCGAGTGACAATGACAATCAGAACTCTAGTAGAAACAAGGAAACTTCTGCCATTGAAGGTGCCAGCGAATCAAGAGTTGATCAACCTCTGAGAAGCAATCAACTCCAGTGCTTGGAAATGGGTTCGGAAGACTCTAATGTGGAGGATGTAGAGGAACTAAACTCACAATGGAATCAAGAGAAGCGATCTAAACTGGAATGTCAGATTACGTCAAGCAATATGGATGGGACATTAATGGGTTTTGTACCCTACAGAAGAGGCGAGGTTGCAGGAGTCGGATCTGTGTCTCTAACGTTGGGTCTCAGACATGGCGTTGAAGGGGTACAACAGCAACAATTCCAGCAGCAGCAGCTTAGACGTCACTTTGGAGGGCAAATGATCAATGACTTTGGGGGCTAA 2328 0.4532 MSNKRPEPHVAQHIRRDKLRIQNSPQHLEDFPNNLEQLSLHPGFSTDLLQVRSVRNANMLYEPPFYSSETVNPSTASNPLSAMMPQLASIFPHSSDPASSSIHSSPEQQCEVRDLGNWRNSGSHQGCDWMLNYASSSAANESIPNPQSIFVSEINNELTGVQIQSSPLNNPSSETATRESQGQLGDIIRSASISGQASEMSSLMQQTGYGIWVENGNQLVYFPNYGNQLTNQSRFGNPSSGTYPMVENSPRCKKSDESSGPLGSDSNNQALSLSLSSHAQSAPCGSDDPQSRYVVSKDLQYSKSVRSISSPSFVSGDSSKSLQNMVVGVPSSSVGPRNVGPLGPFTGYAIILKSSNFLEPAQQLLDEICRQSSQNIMKQFDFSGGVSGEVGAPTSANAVRATKESGVGAKKGNSVASSSMFPSSNGNENSGDGRAGSSAHLSSRPEYQQRMAKFLYMEEEVIRRYKQHHQQMQMVVSSFESVAGLSSSTPYISKALKSVSRHFRYLENAISDQLKRIREVLGEELAGPTSGSGKLDSNMARLRFLDQSFQKNKFIVGSAGFLEHEQHSWRPQQKGLPERAVAVLRAWLFEHFLHPYPTDADKHMLAARTGLSRNQVSNWFINARVRVWKPMVEEIHMLERKGLASDNDNQNSSRNKETSAIEGASESRVDQPLRSNQLQCLEMGSEDSNVEDVEELNSQWNQEKRSKLECQITSSNMDGTLMGFVPYRRGEVAGVGSVSLTLGLRHGVEGVQQQQFQQQQLRRHFGGQMINDFGG 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3658 775 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 262 654 - -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 232 269 - -
Bisa02g3658 775 SMART HOX_1 568 634 IPR001356 GO:0003677
Bisa02g3658 775 Gene3D - 573 635 - -
Bisa02g3658 775 SUPERFAMILY Homeodomain-like 576 636 IPR009057 -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 643 674 - -
Bisa02g3658 775 Pfam Associated with HOX 351 511 IPR006563 -
Bisa02g3658 775 Pfam Homeobox KN domain 587 626 IPR008422 GO:0003677|GO:0006355
Bisa02g3658 775 SMART prehox3 346 512 IPR006563 -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 400 445 - -
Bisa02g3658 775 FunFam BEL1-like homeodomain protein 9 573 635 - -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 232 246 - -
Bisa02g3658 775 CDD homeodomain 576 631 IPR001356 GO:0003677
Bisa02g3658 775 ProSiteProfiles 'Homeobox' domain profile. 567 630 IPR001356 GO:0003677
Bisa02g3658 775 MobiDBLite consensus disorder prediction 644 674 - -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 411 445 - -
Bisa02g3658 775 MobiDBLite consensus disorder prediction 163 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3658 Bisa-ChrBisa02 89283509 89287088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3658 352 746 Homeobox Transcription Factor Family AT4G34610 38.095 3.56e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa02g3658 POX 6.5e-34 No_clan