Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3634 ATGGTGATCTGTTCTGTTTTCTTCTCGGATTTTATTCTTTTCTTCCCTGATCTCTTTCATCTCTCCTCGATTCTCCAAGGTCTATTTAAGATGGTGTCTGACGCAAGTAAGAAGAAGGCAGCGCAGAAGAAGGCGGCTGCTGCTGCTAAGAGAGGAGGGAAGGCGGCAGCAGCAGCTGCTTCATCAAAAGCAGCTGCTGAGTCTCAGAAGTCTGCTGATAAGCTTGCCAATGGAATTGGCGATGTTCATATTTCCGATCGGACATGCACCGGTGTTCTCTGCTCCCATCCTCTCTCTAGGGATATTCGGATAGAGTCTCTATCGGTTACCTTCCACGGACATGATCTCATAGTTGATTCCGAATTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGTTTGAATGGTTGTGGAAAATCTACTCTGCTTACCGCAATAGGTTGCCGGGAGCTTCCTATCCCAGAACACATGGACATTTATCACCTGACTAGGGAAATTGAAGCTTCTGACATGTCTTCATTGGAGGCTGTGATAAGCTGTGATGAGGAAAGGTTGAAATTGGAGAAAGAAGCTGAAACTCTGGCAGCACAGGATGATGGAGGCGGTGAAGCTCTTGATCGTATTTATGAACGATTGGATGCCATGGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATCTTATTTGGTCTTGGTTTCAATAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTAGCTAGAGCTTTATTTATGAACCCAACCATTCTTTTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTTTGGCTGGAGGAGAATTTGAAAAAGTTTGATCGCATTCTGGTTGTGGTTTCACACTCCCAGGATTTCCTTAATGGTGTCTGTACAAACATCATCCACATGCAAAATAGAAAGCTGAAAATCTACACAGGTAACTATGACCAATATGTTCAGACACGTTCTGAACTGGAAGAGAACCAGATGAAGCAGTACAAGTGGGAACAAGAGCAGATTTCCTCAATGAAGGAATATATTGCACGATTTGGGCATGGCTCAGCAAAACTGGCTCGTCAGGCTCAGAGTAAAGAAAAAACGCTGGCAAAAATGGAAAGGGGTGGTCTTACAGAGAAGGTGGTCAAAGATAAAGTTCTGGTATTCCGGTTTGCAAATGTGGGAAAGCTCCCCCCTCCTGTCCTTCAGTTTGTTGAGGTGTCATTTGGTTACACTCCTGAAAATCTCATCTACAAGAACATTGACTTTGGGGTTGATTTAGACTCTAGGGTTGCTTTGGTTGGACCCAATGGGGCTGGGAAGAGTACACTTCTAAAGCTAATGACTGGTGATTTGGTTCCTACTGATGGCATGGTCCGACGGCATAATCATCTTCGTATTGCACAATATCACCAGCACTTGGCTGAAAAGCTAGATTTGGAAATGTCTGCTCTCCTGTATATGATGAGAGAGTATCCTGGAAATGAGGAAGAGAAGATGAGGGCAGTTATTGGGAGGTTTGGGCTGACAGGTAAAGCCCAGATTATGCCCATGAAGAATTTGTCTGATGGGCAGAAAAGCCGTGTGATTTTTGCATGGTTGGCATGGAGGCAGCCTCACATGCTGCTTTTAGACGAGCCAACTAACCATTTAGATATTGAGACGATTGATTCATTGGCTGAGGCGTTGAATGAATGGGATGGTGGCTTGGTGCTTGTTAGCCATGATTTTAGGCTTATAAATCAGGTAGCCCATGAGATATGGGTTTGTGCAGATCACTCTGTGACCAGATGGGAGGGTGACATTATGGATTTCAAGCAGCATCTTAGGTCAAAGGCTGGCTTATCTGACTGA 1887 0.4457 MVICSVFFSDFILFFPDLFHLSSILQGLFKMVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAESQKSADKLANGIGDVHISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLTREIEASDMSSLEAVISCDEERLKLEKEAETLAAQDDGGGEALDRIYERLDAMDAATAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKIYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFANVGKLPPPVLQFVEVSFGYTPENLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPTDGMVRRHNHLRIAQYHQHLAEKLDLEMSALLYMMREYPGNEEEKMRAVIGRFGLTGKAQIMPMKNLSDGQKSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADHSVTRWEGDIMDFKQHLRSKAGLSD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3634 628 Pfam ABC transporter 120 274 IPR003439 GO:0005524
Bisa02g3634 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 607 IPR027417 -
Bisa02g3634 628 Gene3D - 102 366 IPR027417 -
Bisa02g3634 628 Gene3D - 376 625 IPR027417 -
Bisa02g3634 628 SMART AAA_5 438 604 IPR003593 GO:0016887
Bisa02g3634 628 SMART AAA_5 126 328 IPR003593 GO:0016887
Bisa02g3634 628 ProSitePatterns ABC transporters family signature. 246 260 IPR017871 GO:0005524|GO:0016887
Bisa02g3634 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 102 342 IPR003439 GO:0005524
Bisa02g3634 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 413 628 IPR003439 GO:0005524
Bisa02g3634 628 Pfam ABC transporter 313 389 IPR032781 -
Bisa02g3634 628 Coils Coil 320 340 - -
Bisa02g3634 628 CDD ABCF_EF-3 102 319 - -
Bisa02g3634 628 FunFam ATP-binding cassette sub-family F member 3 373 627 - -
Bisa02g3634 628 Pfam ABC transporter 429 560 IPR003439 GO:0005524
Bisa02g3634 628 CDD ABCF_EF-3 413 604 - -
Bisa02g3634 628 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 44 623 - -
Bisa02g3634 628 FunFam Abc transporter f family member 1 102 366 - -
Bisa02g3634 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 349 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3634 Bisa-ChrBisa02 88789249 88792882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3634 413 606 Calmodulin-binding Proteins AT2G36910 25.893 2.91e-10 61.6