Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3627 ATGGGAAGAGCTCCTTGTTGTGACAAAGCGAATGTGAAGAAGGGGCCATGGTCACCTGAAGAAGATTCCAGGCTTAAAGAGTACATCGAGAAGAATGGGACAGGAGGCAATTGGATTGCTCTTCCTCAGAAAGCAGGTTTAAAGAGGTGTGGAAAAAGTTGCCGATTGAGGTGGCTAAACTATCTGAGGCCCAACATTAAGCATGGAGAATTCTCTGATGACGAAGACAGGATAATATGCAGCCTCTATGCTAATATTGGAAGCAGGTGGTCAATCATAGCTGCCCAGTTGCCAGGCAGGACAGACAATGATATCAAGAACTACTGGAACACCAAGCTGAAGAAGAAGCTCATGGGTTTGCTTCCTCCATCTCATCATCATGATCAGAGAAAAACTCCATCAGTTCAATCCTCTCATCATGATCAAAGCCCACCATTATTTCCTTCTTCTCAGTCACTATACAGAGACTTCAGCTCTTACTACACCACCAGTACCCCATCAACCATATCCTTCACAGCCCTTGAACCCTCTTCTTCTGTGCCTCCTGCCAATTTCCCTTATTTCCAAAACCAAGAGGCCTCATTGGTGGGTGGTCCAATGCAATACTACTACATGTTTGGAAGTGAAGGAAGTTGCAGCACTTCATCCGATGGAAGCTGCAGTCAAATCAGCCATGGCAGAGGAGACATGAAGCAGGAAGAAGTGGGGTTTCAGTTTCATCACAACTATGTGGCCAATGGTGGATCAGGGGTTGAATTAGAGTTCAGCAACAAGCTAATGCCTGGAGGGAGTGAAACTGAAAATGATCTTAACCAGTGGACAGAGAAGGGAAGTGGGTATTATGCACAGACCCCAACAATGGATTATGGGATTGAGGACATAAAGGAGCTGATTAGCAGTAGTAATAATGGGGTGTTTAACAGTAATATTGATGAAATCAAGAGAGAGGAGAAGGGGATGATGAATATGAATATGAATATGAATATGATGTACTACTACTACTGA 1005 0.4408 MGRAPCCDKANVKKGPWSPEEDSRLKEYIEKNGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSHHHDQRKTPSVQSSHHDQSPPLFPSSQSLYRDFSSYYTTSTPSTISFTALEPSSSVPPANFPYFQNQEASLVGGPMQYYYMFGSEGSCSTSSDGSCSQISHGRGDMKQEEVGFQFHHNYVANGGSGVELEFSNKLMPGGSETENDLNQWTEKGSGYYAQTPTMDYGIEDIKELISSSNNGVFNSNIDEIKREEKGMMNMNMNMNMMYYYY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3627 334 CDD SANT 70 111 IPR001005 -
Bisa02g3627 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa02g3627 334 MobiDBLite consensus disorder prediction 120 145 - -
Bisa02g3627 334 FunFam Transcription factor MYB36 70 140 - -
Bisa02g3627 334 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa02g3627 334 Gene3D - 69 143 - -
Bisa02g3627 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bisa02g3627 334 FunFam Transcription factor RAX3 7 68 - -
Bisa02g3627 334 MobiDBLite consensus disorder prediction 121 135 - -
Bisa02g3627 334 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bisa02g3627 334 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa02g3627 334 SMART sant 13 64 IPR001005 -
Bisa02g3627 334 SMART sant 67 115 IPR001005 -
Bisa02g3627 334 CDD SANT 16 62 IPR001005 -
Bisa02g3627 334 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bisa02g3627 334 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa02g3627 334 Gene3D - 7 68 - -
Bisa02g3627 334 PANTHER OS09G0431300 PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3627 Bisa-ChrBisa02 88717806 88719320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3627 1 161 MYB Transcription Factor Family AT5G57620 66.857 1.31e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g3627 Myb_DNA-binding 1.3e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1199 12 20393965 20394990 Bisa02g3627 02 88717806 88719320 CCT