Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3608 ATGAACATGAACGAGTTTGAGGTGCACGACTTCATCGACGAACCAAACTTTGATCAGTTCATAAACCTGATTCGTGGTGACAACGAAGACCCCCTCCTCCCTGCCTTCGATCCCATACCTGACCTCATCAATGCCTGCTTTCCTCCATTTGACTACTCCAACATTGCACTCGGTGTCAATGAACCAATTCCAAACTCTGCACTTTCCTCATGTTTTGGTGGAGAAATTAATAAGCCCAGGGGAGAAGCAGAAGCAGATCATCAAGAAGAAAATGATCATGGGGATGTCCCTTCTGCTACAACCATCAAACACAGGACTAAACCTGATAGGTCCAAGACTCTGATTTCTGAGAGAAGGAGAAGAGGACGAATGAAGCAGACTCTTTATGCATTGCGCTCTTTGGTTCCTAGTATCACTAAGATGGATAAGGCAAGTATAGTGGGAGATGCTGTATCATATGTCCAGGAGCTTCAGACACAAGCTGAGAAGCTGAAGGCCGAGGTTGAAGTTCTTGAAGCATCCTTATTAGCCTCATCACAAGGATCAGTTGAAAACCCCCTGAGAATCCACAGCCATTTCATCCTCTGCAAGAACATCATGCAGATGGAGGTGATGCAAGTGGAGGAAAGAGGGTTTTATGTGAAAGTGGTAAGCAACAAAGGAGAAGGGGTGGCTTCCTCACTGTACAGGGCTTTTGAGTCTTTGTCAGGGTTCAGTGTTCGCAATTCTAACCTGGCTACACTTTCTGATACATTTCAACTTACATTAACTTTGAAAGTAAAAAGTTGTGAGGCAGAAATCAACCTTCAAAATGTAAAATTGTGGTTGGCAGGCGCTCTTCTCAATCAAGGCTTCGAATTTATGACATGTTTTCCTGCGTAA 882 0.441 MNMNEFEVHDFIDEPNFDQFINLIRGDNEDPLLPAFDPIPDLINACFPPFDYSNIALGVNEPIPNSALSSCFGGEINKPRGEAEADHQEENDHGDVPSATTIKHRTKPDRSKTLISERRRRGRMKQTLYALRSLVPSITKMDKASIVGDAVSYVQELQTQAEKLKAEVEVLEASLLASSQGSVENPLRIHSHFILCKNIMQMEVMQVEERGFYVKVVSNKGEGVASSLYRAFESLSGFSVRNSNLATLSDTFQLTLTLKVKSCEAEINLQNVKLWLAGALLNQGFEFMTCFPA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3608 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Bisa02g3608 293 SMART finulus 114 163 IPR011598 GO:0046983
Bisa02g3608 293 MobiDBLite consensus disorder prediction 79 110 - -
Bisa02g3608 293 Gene3D - 101 174 IPR036638 GO:0046983
Bisa02g3608 293 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 104 174 - -
Bisa02g3608 293 Pfam Helix-loop-helix DNA-binding domain 115 158 IPR011598 GO:0046983
Bisa02g3608 293 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 283 - -
Bisa02g3608 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 176 IPR036638 GO:0046983
Bisa02g3608 293 Coils Coil 154 174 - -
Bisa02g3608 293 MobiDBLite consensus disorder prediction 74 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3608 Bisa-ChrBisa02 88527196 88528352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3608 2 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 49.843 2.25e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g3608 HLH 3.2e-09 No_clan