Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3601 ATGGCTATTGTTGGTCTGCGCAATGTGTCTGTGCTTGACTCTTCTTTCCTTAGGGATTCCCATTCTCAATCATCCAGGAGGCAAGGAGATGGAGGGATGGGAAGCACCCGGTCATCTTCACTTTTGCAAATGTGGCAGGGGATTGAGGATGAGCCTGTGGTGAGTCAAGCTCAAGGAAGAACCAGTGAATTGTTGCTTCAGCAAAGGACTGATGGGTTGATTGCTGACCTCTCGCAGGCAAATCTACCAGATAGTTATGAGAGAGGACAAAGCCATATTCTAGAAGATGCAGTTTTGGGTGACAATGGATGTGAAACATGGTCACAGTCACAGAGTCCAAACGAGTCTCTTGATAAACAGGAGGAGTTAAACAATTCTAGTTGTGAAATATCCTCTGATCTTGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGGACAGTGGTGCTAGGGATCATGCATCAAACATTTCCCGAAGAAATAACAGTTCTGGGGCAGAATGGCTTGGTGAAACTGAGCAGGAGAGGGTGAGAATTATTAGGGAGTGGGTACAAATGAGTAGCCAGCAAAGAGGTGTTTCCCCTGGGGACAATAAAGAAGAACAATCCGCTGAAATTGGCTTCCAAATTGAACGTGTTCGCGATGGATTGGTTATTAATACGAATGAGGGCCAAATTGAGCATACTCGGAAGGGTATTCGTAAATTATGTGGCAGACAGGTTCTGCTTGATATGCTTATGAAGGCTGAGAGGGAAAGGTACAGAGAAGTTCAGGAGTTGTTGGAACATCGGGTTGTATCTCATTTTCCCCATCGCAATCGCATTCAGGCATTGCTTAGGGGCAGGTTTTTGAGAAACGATAGATCCGCCGATAATAAAAGGTCCATTTCTGTCGCGGAGTGTGAATTAGGCTTACTGAGGCAAAAGCAGACTGTGTCAGGTTTAAGGGAAGGATTTTTATCTAGGCAGGACGTCTCTGGTTGCCGTTTAGTGACCGCCAATGTAACTCGTGCCACATCAAACAGTGATATCGATGCTGATACAAATGAACCAACCGAAACCAGCAGTTCACAAATGGTCCTAAATGTTCATTCTGAACTGTCTGAGCCTAATTACAGGGGAAGTGATATAATTGGGATATCAGGAAGTCACAGTTGTTTGCCGGTAACTGCACGTGAGAAATTAGATTGGCAAGACTCTTCTGCTCATATTGCCGGAGGGCAGCTACAGCTTTCGGAAATTGAATCAAGAGATTCACAATCGTCAACCACTGTTGGGATCGAAAGAAGAGATGACTGTGGACAAAGTTTTGATGTGATATCCACTGAAAATGCTGATAATGAGCTTAGCCAATCATGTTTGCAAATTGAAGATACGGAGCATAGTGATGTGCAGGAATTTAGTGAGAAACATACTGAACAGTTCGAGCTAGGTGGTGTAACTAATCTTGAAGACGGCTTTTCAAGTCACGGCAATTATACAGGGGGAAATATCATTGATGATTTGGACTTAAATGAATTTGCTGCTCTGGAAGGAGAGCAGCAAGTGGGTTTTGATAATGAGGGGAATCACTGGCTTCCAACTAATGTTGAATGGAGAACTGACCCCACCGCGGAAAGTATGGATGTTAATCATCCAACTGCTGCAGCAAATGAGTGGCCCCAGCACATCTTGGAAAGTGAAGATGGGGAAGACTCACATCTGCAAGATGTACCTGAAATGTGTCCAGATGGCAGCTCTCAAGAGGCTGTAGAAAATTGGTTGGGAGGATCTATTGATCATGAAGGTCCTGCAGTTGTCAGAACTCAAGGAATTTATTTTTCTGATGATGACAATGTGTATAGTGGGGAACTCGGGGAACTGCTAAGTAGGCGACGTGTTTCAAATCTTCTTAGAAGCAGTTTTGGTGACAATCTTGACCAATTGATGCAATCATATGTTGAAAGGCAAAATCATGCTCAGATTGAGTGGGAGCTGCAAGAATTAACCCCCTCTTCTGATTCAGTCCAAGAGGACCTGGACCAGCAGGCTACTGATCAGATTAGTGGTCAGGAGGAGGGTGCTGCTGACAGTCCAGTTTACCTGCCCTCATCACCGACACCTCCTCAGCATCAGTTACATCACGACTACTGGCCACCGAATGACCCGAATAATCAGCATACTGGAATTGAGTGGGAGATCATCAATGGCTTGAGGAGTGATGTGACTGAGCTACAGCAGAGGATGAACAATATGCAGCGGATGCTGGAGGCCTGTATGGAAATGCAGCTTGAGTTGCAGTGCTCATTGAGGCAAGAAGTTTCTGCAGCCCTTAATTGCTCAGCTGGTTCATCAGGACTGCACGACCATGATTCACCAGATGATAAATCTAAATGGGAGTGCGTGAGAAAAGGACTTTGCTGTATATGCAGTGAGAGCAATATTGATTCTTTATTGTACAGATGTGGTCATATGTGTACATGTTTAAAGTGTGCGAATGAACTGTTTGAGAGCAGGAAAAAGTGCCCAATGTGTCAAGCTCCTGTAGTGGAGGTGATACATGCTTACTCTATACTATAA 2571 0.4457 MAIVGLRNVSVLDSSFLRDSHSQSSRRQGDGGMGSTRSSSLLQMWQGIEDEPVVSQAQGRTSELLLQQRTDGLIADLSQANLPDSYERGQSHILEDAVLGDNGCETWSQSQSPNESLDKQEELNNSSCEISSDLGEVERERVRQIFREWMDSGARDHASNISRRNNSSGAEWLGETEQERVRIIREWVQMSSQQRGVSPGDNKEEQSAEIGFQIERVRDGLVINTNEGQIEHTRKGIRKLCGRQVLLDMLMKAERERYREVQELLEHRVVSHFPHRNRIQALLRGRFLRNDRSADNKRSISVAECELGLLRQKQTVSGLREGFLSRQDVSGCRLVTANVTRATSNSDIDADTNEPTETSSSQMVLNVHSELSEPNYRGSDIIGISGSHSCLPVTAREKLDWQDSSAHIAGGQLQLSEIESRDSQSSTTVGIERRDDCGQSFDVISTENADNELSQSCLQIEDTEHSDVQEFSEKHTEQFELGGVTNLEDGFSSHGNYTGGNIIDDLDLNEFAALEGEQQVGFDNEGNHWLPTNVEWRTDPTAESMDVNHPTAAANEWPQHILESEDGEDSHLQDVPEMCPDGSSQEAVENWLGGSIDHEGPAVVRTQGIYFSDDDNVYSGELGELLSRRRVSNLLRSSFGDNLDQLMQSYVERQNHAQIEWELQELTPSSDSVQEDLDQQATDQISGQEEGAADSPVYLPSSPTPPQHQLHHDYWPPNDPNNQHTGIEWEIINGLRSDVTELQQRMNNMQRMLEACMEMQLELQCSLRQEVSAALNCSAGSSGLHDHDSPDDKSKWECVRKGLCCICSESNIDSLLYRCGHMCTCLKCANELFESRKKCPMCQAPVVEVIHAYSIL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3601 856 Coils Coil 732 759 - -
Bisa02g3601 856 MobiDBLite consensus disorder prediction 668 722 - -
Bisa02g3601 856 SUPERFAMILY RING/U-box 803 849 - -
Bisa02g3601 856 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 783 854 IPR013083 -
Bisa02g3601 856 MobiDBLite consensus disorder prediction 17 38 - -
Bisa02g3601 856 CDD mRING-HC-C3HC5_NEU1 804 853 - -
Bisa02g3601 856 MobiDBLite consensus disorder prediction 104 131 - -
Bisa02g3601 856 Pfam Zinc finger, C3HC4 type (RING finger) 801 848 - -
Bisa02g3601 856 ProSiteProfiles Zinc finger RING-type profile. 804 843 IPR001841 -
Bisa02g3601 856 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 856 - -
Bisa02g3601 856 MobiDBLite consensus disorder prediction 668 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3601 Bisa-ChrBisa02 88431396 88435549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1169 12 19918935 19928133 Bisa02g3601 02 88431396 88435549 CCT
Bisa02g3601 02 88431396 88435549 Bisa02g3601 02 88431396 88435549 ECH