Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3585 ATGGAAACCCCTGTTATTAGATCGAGGGGTCGGCCGAGGAAACGGAGGAGAAAAGAGGATGAAAATGAGACCGATGATGGGAGATCGATTCCTGATTTGAAAAGGCAAGCTGTTGGGACAAGACCAATAGCACTGGTTGGACGATATGTACTTAAAGAGTTCAGGGGAAGTGGGGTTTTCCTTGGGAAAGTTGTGTATTACGAGTGTGGTTTATATAGAGTCCACTACGAGGACGGTGATTTTGAGGATTTAGATAGCAGCGAGATTCGTGCAATACTTCTTAACGATAGTGATTTTGATGATGGTTTGACTAAAAGGAGGCATGAATTAGATGAATTTGTGTTGAAGAGTAGTGCGAAGATAACAGATGGTACGGAGAAGAGTTCCGCGGACTTAAACAAAGATGTCTGCGAGGTTGAGGTTCCTGTATCAAGTGAATTGCCTGATGGGTTGTTGATTGAACATGGTGGCGTAGAAGTTGAAGGGGATGATGGTTCGTCAAGTGACTCAATTGAAGGCTTAAAGGAAAGGGATTCCGGGTCTGATGCCGAGACGCCATATCTACCTCCATTGCAGTTGCCACCGTCTTCAGGAACTATTGCTGTGCCAGAGCCATATATCTCTCATCTTTTTGCAGTCTATGGATTCTTACGGTGCAGTGATTGGGGCTTGCTTGATACTCTGACTTGGCCTGTTTTTGTGATTCAGTATCTAGCAATTAATGGATACACAAAAGGACCTGAGTGGAAGGGATGTTATCACGAGATTTTTAATGGTGAGTATTATTTGTTACCTGTAAGTAGGAAGTTGATTATACTGCAAATTCTCTGCGATGATGTTTTGGAGTCTGAGGAACTTAAGGCTGAAATGAGCATTCGTGAAGAATTGGAAGTTGGGATGGAGTATGATGCAGAAGATATCCTTCCAGCAGAAAATTGGCTAAGAAGAGTCCCTCCTAGAAATGCCAAAACTGCTGCTTACAAGGATAGGGAAGCTACAAATTTTGTTTCAGAATCTGCCGTGAAGCTACCTGGTAACTCTGTTTTAGATTTGGGAGATACTGGAAGGACTGAGGATGCTGATGTTGATAGAAATGGCGATGAATGCCGCCTCTGTGGCATGGATGGGACCTTGCTTTGCTGTGATGGATGTCCATCTGCATATCACTCTAGGTGTATTGGAGTGATGAAAATGTTTATACCAGATGGGCCATGGTATTGTCCAGAGTGCAAAATTAATCTGAATGGGCCAACAATTGCAAAGGGAACATTGCTTAAAGGGGCTGAATTATTTGGAATGGATCTGTATGGACAACTCTTCATGGGTGCTTGCGACCACTTATTGGTGCTCACTGTCAACAGTGAACTTTGTCTCAGATATTACAACCAGAATGACATTTCAAAAGTTCTCCAAGTGCTTTATGCATCTGCTGAGCATAGACATCTATATCATGGAATTTGTATGGCTGTATTACGATATTGGAACATTCCAGAAAGTATCTTGCCCATTTCTTTTCCAACTGGAACATATGTGAACTCATCAAATACAGAGGAAGATGCAAAGTCATTTAGTTTAGTACCTACTTCTTTGGGTGAAATAGACCACAGAACTGTTAATTTGGTGAAGGCAGAGTACCCTGTAACCATTGGGAGCACAATTCATGGTGATAATATGGTTCCATCTTGTGATGCCTCATTGGTTACCGCTCCAAAGGAGACTTGTGCTCTTGATAGCAGTAGTGATACTAGAACAAAGGCGTGCCTTACCATGAATACTATGTTTCCTGAGGAGACTAGGATGGAGTGTGTCATCTCTGGTGGTCCTGAGAGTTGTGCGTATGCAAATGATAAGCAATTGCCTATGAATCTGTCCTTGCAAATTAAAGAAGGCAATCAAGCTAGTTCTGGAAAGGTTGAATACAATTCAACTAAGGATTCTGTATACATGGGGTTTTCTTATAAGCCTCATTCATACATTAATCACTATATGCATGGTGATTTTGCTGCATCTGCTGCTGCTAAATTGGCTATTCTTTCCTCAGAGGATTCTAGGTCAGAAGGTCATGTGTCAGATAATTTAAGGAAAGTTACATCTGGGAGCACTTATTTGCAAGCAAAAGCATTCTCACTAATAGCTTCACGCTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAAGTTCCTAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCCCCTGTCTCAAGCAAAAGAGGGTGCATGCTAAATCATGCTGCCCTAAGTGCCACCAAAAGTGCTACGAAAATCCTTGCTGGTCTTTCCACTGTAAAGAGTGGAGAGGGAATTCTTCCTAGCATTGCAACATACATTATATACCTGGAGGAAAGTTTACATGGTTTAGTAGTTGGGCCCTTTCTAAGTTCAGATTACAGAAAACAATGGCGTAAGCAAGTTGAACAGGCTAAAACATTTAATGCTGTAAAGCCCCTTTTGCTTGAAACACGCGCTCCAAGTGGGAGGCGTTACAAGAAACAGTCAGCCATTGATGAAGTTACAGCTGATGGTTGCCATGAAAACAACTTTGACTGGTGGTATGGTGGTAATTTCACGAAGTTTTTATTTCAGAAAGCAGTGTTGCCAAAATCTATGGTCAGAAAAGCAGCCCGACAAGGTGGATTGAGGAAAATTTCTGGCATTTCCTATGTTGATGGCTCTGAAATTCCTAAAAGAAGCCGACAGATAGTTTGGAGGGCTGCAGTTCAAATGAGTAGGAATGCATCACAGCTCGCACTTCAGGTCAGGTACCTAGATTTTCATCTTAGATGGAGTGACCTGATTTGTCCTGAGCAAAACGTCTTGGATGGGAAAGGTCAAGAGACTGAATCTTCTGCTTTCAGAAATGCTAATATCTGTGATAAAAAAGAAGTGGAGGGAAAACTTTTGTATGGAATTGTTTTTGGGAACCAAAAGCATCTTCCTTCTCGTGTTATGAAAAATGTTGTTGAAATAGAGCATGGTCCTCAAGGAAAGGAAAAGTATTGGTTTTCTGAATCACGTATTCCTTTGTATTTGGTAAAAGAGTATGAAGAAGGTATAGACAAAGTGCCATCTCATGAAGAAAACCTGAATTTGGCATCTCAGCTGCGAAGGAGGCGGTTGAAAGCTATCTGCAGGGATATATTTTTTTACCTCACTTGCAAGAGAGACAAATTGGATATATTCTCATGTTCAGTGTGTCAGTTGGACGTTTTAATTGGGAATGCTCTCAAGTGCAGTGCATGTCAAGGTTATTGTCATGAGAGCTGCTCTGTAAGTTCAACATTCTCTACAAACAAGGAAATTGAGTTCTCAACCACATGCAAGCAATGTTGGTATGCCAAATCTCTTACTCAGAAGGAGACCAGGAATGAATCTCCAACCAGTCCCTTACTCATACGAGGACAGGAGCATAGCTCTGTGTCTACTTTGAAGGGATCAAGGCCTAAATGTTATGATCAAGCTTTGAAATCTACTAGGGTTAAGGATACTCGTTCTGACACGGAACAAGGTGCTTCTGATTCCACTTTACCAGTGAAAAGCCGTCGCAGGAATTGTTCTTGGGGAATTATATGGAATAAGAAGAATGTTGATGATAATACAGGCATTGCTTTCAGGCTTAAAAATATACTTTTAAAAGGAGGATCAGGTGCACCTCAATTAAAACCTGTATGTCACTTGTGCCGTAAGCCATATAGGTCTGATCTGATGTATGTTTGCTGTGAGACATGCAAAAATTGGTATCATGCTGATGCTCTTGAACTTGAAGAGTCTAAAATTTTTGATGTGTTGGGATTCAAGTGTTGCAAATGTCGCAGGATAAAATCTCCTGTGTGTCCTTACTCTGATTTGAAGCCCAAGATGCAAGAGGGCTCTAAGAAACACGCGAGAGCTTCAAAGAAAGATCATTCTGGAAAAGATGATTCTGGAATTATTTCTGAATTGAAAGAGTGTGAGCCTGCTACCCCTAACTTTCCCATAGGGGATGGGTTGGGACAAGACAATGACCCTCTGCTTTTCTCTCTTTCAACTGCTGAGTTGATAACAGGACCTAATAATACAGAAGTGGATGTTGAGAGGAATGGTGTCTCTGGCCCTGGGCTTCAGAAACTACCTGTGAGAAGACATGTTAAGCTTGAGGGGGATGTTGATGATTCTTTTGGAAGTAAATTTCCACAGGATGAATTTTTAACACAAAATGGAAGAAGTAATTTGTCAGCTGTAGAGAATGGTTCATCCCCTTCTGTGGAATATGATTCTTCTGTTTGCCTTGACAGCAATCTCTTGAATGATTGTGAAAATGTGAATTATGAATTTATGGAGTTTGAACCCCATACTTACTTCTCCGTTACAGAATTGCTGCAGCTAGACGATAATCAGTGTGAGGGAGCTGATATATCTGGGGAACTGTCAGGATACTTGGGAAACTCTTGCACTATGAATGGCATTCCCGAAGACTGCGGAGCTGCTAGTTTAGTTGATAAACAGGAACCTGGAACTCCATTGCAAGGCATTCTTTGTTGCCAATGCTCACAGATGGAACCAGCCCCTGATCTCTTTTGTGAGATTTGCGGGCTTTGGATTCACAGCTATTGTTCGCCCTGGGTTGAATCACCTAGGTTGGGAAGCTGGAGGTGCGGTAATTGTCGGGAATGGCAATAG 4683 0.4183 METPVIRSRGRPRKRRRKEDENETDDGRSIPDLKRQAVGTRPIALVGRYVLKEFRGSGVFLGKVVYYECGLYRVHYEDGDFEDLDSSEIRAILLNDSDFDDGLTKRRHELDEFVLKSSAKITDGTEKSSADLNKDVCEVEVPVSSELPDGLLIEHGGVEVEGDDGSSSDSIEGLKERDSGSDAETPYLPPLQLPPSSGTIAVPEPYISHLFAVYGFLRCSDWGLLDTLTWPVFVIQYLAINGYTKGPEWKGCYHEIFNGEYYLLPVSRKLIILQILCDDVLESEELKAEMSIREELEVGMEYDAEDILPAENWLRRVPPRNAKTAAYKDREATNFVSESAVKLPGNSVLDLGDTGRTEDADVDRNGDECRLCGMDGTLLCCDGCPSAYHSRCIGVMKMFIPDGPWYCPECKINLNGPTIAKGTLLKGAELFGMDLYGQLFMGACDHLLVLTVNSELCLRYYNQNDISKVLQVLYASAEHRHLYHGICMAVLRYWNIPESILPISFPTGTYVNSSNTEEDAKSFSLVPTSLGEIDHRTVNLVKAEYPVTIGSTIHGDNMVPSCDASLVTAPKETCALDSSSDTRTKACLTMNTMFPEETRMECVISGGPESCAYANDKQLPMNLSLQIKEGNQASSGKVEYNSTKDSVYMGFSYKPHSYINHYMHGDFAASAAAKLAILSSEDSRSEGHVSDNLRKVTSGSTYLQAKAFSLIASRFFWPSSEKKLVEVPRERCGWCLSCKAPVSSKRGCMLNHAALSATKSATKILAGLSTVKSGEGILPSIATYIIYLEESLHGLVVGPFLSSDYRKQWRKQVEQAKTFNAVKPLLLETRAPSGRRYKKQSAIDEVTADGCHENNFDWWYGGNFTKFLFQKAVLPKSMVRKAARQGGLRKISGISYVDGSEIPKRSRQIVWRAAVQMSRNASQLALQVRYLDFHLRWSDLICPEQNVLDGKGQETESSAFRNANICDKKEVEGKLLYGIVFGNQKHLPSRVMKNVVEIEHGPQGKEKYWFSESRIPLYLVKEYEEGIDKVPSHEENLNLASQLRRRRLKAICRDIFFYLTCKRDKLDIFSCSVCQLDVLIGNALKCSACQGYCHESCSVSSTFSTNKEIEFSTTCKQCWYAKSLTQKETRNESPTSPLLIRGQEHSSVSTLKGSRPKCYDQALKSTRVKDTRSDTEQGASDSTLPVKSRRRNCSWGIIWNKKNVDDNTGIAFRLKNILLKGGSGAPQLKPVCHLCRKPYRSDLMYVCCETCKNWYHADALELEESKIFDVLGFKCCKCRRIKSPVCPYSDLKPKMQEGSKKHARASKKDHSGKDDSGIISELKECEPATPNFPIGDGLGQDNDPLLFSLSTAELITGPNNTEVDVERNGVSGPGLQKLPVRRHVKLEGDVDDSFGSKFPQDEFLTQNGRSNLSAVENGSSPSVEYDSSVCLDSNLLNDCENVNYEFMEFEPHTYFSVTELLQLDDNQCEGADISGELSGYLGNSCTMNGIPEDCGAASLVDKQEPGTPLQGILCCQCSQMEPAPDLFCEICGLWIHSYCSPWVESPRLGSWRCGNCREWQ 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 1293 1315 - -
Bisa02g3585 1560 SUPERFAMILY FYVE/PHD zinc finger 1502 1558 IPR011011 -
Bisa02g3585 1560 ProSitePatterns Zinc finger PHD-type signature. 369 410 IPR019786 -
Bisa02g3585 1560 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1221 1293 IPR013083 -
Bisa02g3585 1560 CDD Tudor_AtPTM-like 46 94 IPR047365 -
Bisa02g3585 1560 CDD PHD_SF 1231 1278 - -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 15 32 - -
Bisa02g3585 1560 Pfam PHD-finger 369 411 IPR019787 -
Bisa02g3585 1560 CDD PHD_SF 1514 1556 - -
Bisa02g3585 1560 ProSiteProfiles Zinc finger PHD-type profile. 366 413 IPR019787 -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 1130 1154 - -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 1 33 - -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 1294 1315 - -
Bisa02g3585 1560 SUPERFAMILY FYVE/PHD zinc finger 358 416 IPR011011 -
Bisa02g3585 1560 SMART PHD_3 1513 1557 IPR001965 -
Bisa02g3585 1560 SMART PHD_3 368 411 IPR001965 -
Bisa02g3585 1560 SMART PHD_3 1231 1279 IPR001965 -
Bisa02g3585 1560 SMART PHD_3 1070 1119 IPR001965 -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 157 187 - -
Bisa02g3585 1560 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 258 290 IPR028942 -
Bisa02g3585 1560 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 359 415 IPR013083 -
Bisa02g3585 1560 PANTHER PHD FINGER FAMILY PROTEIN 40 218 - -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 157 182 - -
Bisa02g3585 1560 MobiDBLite consensus disorder prediction 1166 1185 - -
Bisa02g3585 1560 SUPERFAMILY FYVE/PHD zinc finger 1230 1285 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3585 Bisa-ChrBisa02 88095225 88101975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3585 234 501 EF-hand Containing Proteins AT5G22760 48.727 2.14e-71 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa02g3585 PHD 8.1e-08 CL0390