Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3583 ATGAGTCCGGCGATGTTGGAGCCGCAGAGGACGGCGGACACCGACACCGTGCCGATTGTTATTGGAGCTGTCGGAGGAAAGTCCGGGGCTGACGGTTCGGAAGTGGGTAAGAGGAGAAGGGGAAGGCCTCGAAAGAACGATGTTAACGGAAACATGCAGATTTCGTTAGCGGCGATGTCGGCGTCAGGTTTTTCGACTTCCCCGTTTGGAAGCTCCGGCAAGCGAGGCAGGGGAAGGCCACGTGGGTCCGGGAAATTGCAGCTTTTGGCTTCTATGGGTGGAATTCTGTCAGACACAGCTGGGGGAAACTTCACTCCTCATGTATTGACTGTGAATACCGGAGAGGATGTGGTGGCTAGGATATTATCATTTTCTCAAAGGGGCCCTCGGGCTGTTTGCATACTCTCTGCTACTGGTGCTGTGGCCAATGCCATCATTCGCCAAAGTGGTTCTTCGGGTGGAATTTTGAGATATGAGGGTCGCTTTGAGATACTATCTTTATCGGGATCATATACTTCCGGTGGCACCGGTGGTAGTGCACATCGCAAAAGTCTCATTATGAGTGTATCACTAGCTAAACCTGATGGAAGGGTCTTTGGAGGTGGTGTTGAGGGTCCACTGGTAGCAGCTGGCCCTATTCAGCTAATTGTGGGCAGTTTCAAGCAAAACATCAGTAATGAAATCAAAAGAAGGCTGTCTCTTGCACCTTCAAGTGCTGCAAACATGCCGGGCGATTCGGATTCAGCAAGGCTTCTTCAAGATCCTAAAATGATAGAATCTGAGCAGAATTTCCCTTCACCGACATCCGGATTTATGCCAACAACTAACGGATTACCAGATCATGTCATGCCTGGAACACCTAACGGATTACTAAATAATGTCACTTCTGCAACGACTAACGGAATACCGGACAGTTACTTTCCGGTGAATCATCAGAACATGCACTCTCTCTCGTTAAGCAATGTCAGCCTAGACAGCCAAGTCCTGCCACCCATGTCAGACCAAATGACGTTCGGAGATCTTAATAATGGTGTCCCTCATCTATGA 1047 0.4938 MSPAMLEPQRTADTDTVPIVIGAVGGKSGADGSEVGKRRRGRPRKNDVNGNMQISLAAMSASGFSTSPFGSSGKRGRGRPRGSGKLQLLASMGGILSDTAGGNFTPHVLTVNTGEDVVARILSFSQRGPRAVCILSATGAVANAIIRQSGSSGGILRYEGRFEILSLSGSYTSGGTGGSAHRKSLIMSVSLAKPDGRVFGGGVEGPLVAAGPIQLIVGSFKQNISNEIKRRLSLAPSSAANMPGDSDSARLLQDPKMIESEQNFPSPTSGFMPTTNGLPDHVMPGTPNGLLNNVTSATTNGIPDSYFPVNHQNMHSLSLSNVSLDSQVLPPMSDQMTFGDLNNGVPHL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3583 348 CDD DUF296 105 220 IPR005175 -
Bisa02g3583 348 Gene3D - 106 236 - -
Bisa02g3583 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 221 IPR005175 -
Bisa02g3583 348 MobiDBLite consensus disorder prediction 62 84 - -
Bisa02g3583 348 SMART AT_hook_2 37 49 IPR017956 GO:0003677
Bisa02g3583 348 SMART AT_hook_2 74 86 IPR017956 GO:0003677
Bisa02g3583 348 ProSiteProfiles PPC domain profile profile. 101 241 IPR005175 -
Bisa02g3583 348 MobiDBLite consensus disorder prediction 1 50 - -
Bisa02g3583 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 268 IPR039605 GO:0003680
Bisa02g3583 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3583 Bisa-ChrBisa02 88022385 88025249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3583 33 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 41.606 2.05e-53 179